LRRC23 (leucine rich repeat containing 23)

2014-11-01  

Identity

HGNC
LRRC23
LOCATION
12p13.31
LOCUSID
10233
ALIAS
LRPB7
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10233
HGNC: 19138
Ensembl: ENSG00000010626

Variants:

dbSNP: 10233
ClinVar: 10233
TCGA: ENSG00000010626
COSMIC: LRRC23

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000010626ENST00000007969Q53EV4
ENSG00000010626ENST00000323702Q53EV4
ENSG00000010626ENST00000415834C9JQN5
ENSG00000010626ENST00000428946F2Z299
ENSG00000010626ENST00000429740E9PDZ4
ENSG00000010626ENST00000431207F2Z299
ENSG00000010626ENST00000433346C9JKE8
ENSG00000010626ENST00000436789C9JEW3
ENSG00000010626ENST00000443597Q53EV4
ENSG00000010626ENST00000451681F2Z299
ENSG00000010626ENST00000622489E9PDZ4

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

LRRC23 (leucine rich repeat containing 23)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/68601/lrrc23