Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MICU3 (mitochondrial calcium uptake family member 3)

Identity

Alias_namesEFHA2
EF hand domain family A2
EF-hand domain family, member A2
mitochondrial calcium uptake family, member 3
Alias_symbol (synonym)DKFZp313A0139
Other alias
HGNC (Hugo) MICU3
LocusID (NCBI) 286097
Atlas_Id 68979
Location 8p22  [Link to chromosome band 8p22]
Location_base_pair Starts at 17027238 and ends at 17122639 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF804A (2q32.1) / MICU3 (8p22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MICU3   27820
Cards
Entrez_Gene (NCBI)MICU3  286097  mitochondrial calcium uptake family member 3
AliasesEFHA2
GeneCards (Weizmann)MICU3
Ensembl hg19 (Hinxton)ENSG00000155970 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155970 [Gene_View]  ENSG00000155970 [Sequence]  chr8:17027238-17122639 [Contig_View]  MICU3 [Vega]
ICGC DataPortalENSG00000155970
TCGA cBioPortalMICU3
AceView (NCBI)MICU3
Genatlas (Paris)MICU3
WikiGenes286097
SOURCE (Princeton)MICU3
Genetics Home Reference (NIH)MICU3
Genomic and cartography
GoldenPath hg38 (UCSC)MICU3  -     chr8:17027238-17122639 +  8p22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MICU3  -     8p22   [Description]    (hg19-Feb_2009)
GoldenPathMICU3 - 8p22 [CytoView hg19]  MICU3 - 8p22 [CytoView hg38]
ImmunoBaseENSG00000155970
Mapping of homologs : NCBIMICU3 [Mapview hg19]  MICU3 [Mapview hg38]
OMIM610633   
Gene and transcription
Genbank (Entrez)AL833419 BC032868 BC045553 BI546243 BX953026
RefSeq transcript (Entrez)NM_001349810 NM_181723
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MICU3
Cluster EST : UnigeneHs.403594 [ NCBI ]
CGAP (NCI)Hs.403594
Alternative Splicing GalleryENSG00000155970
Gene ExpressionMICU3 [ NCBI-GEO ]   MICU3 [ EBI - ARRAY_EXPRESS ]   MICU3 [ SEEK ]   MICU3 [ MEM ]
Gene Expression Viewer (FireBrowse)MICU3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286097
GTEX Portal (Tissue expression)MICU3
Human Protein AtlasENSG00000155970-MICU3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86XE3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86XE3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86XE3
Splice isoforms : SwissVarQ86XE3
PhosPhoSitePlusQ86XE3
Domaine pattern : Prosite (Expaxy)EF_HAND_1 (PS00018)    EF_HAND_2 (PS50222)   
Domains : Interpro (EBI)EF-hand-dom_pair    EF_Hand_1_Ca_BS    EF_hand_dom   
Domain families : Pfam (Sanger)EF-hand_8 (PF13833)   
Domain families : Pfam (NCBI)pfam13833   
Domain families : Smart (EMBL)EFh (SM00054)  
Conserved Domain (NCBI)MICU3
DMDM Disease mutations286097
Blocks (Seattle)MICU3
SuperfamilyQ86XE3
Human Protein Atlas [tissue]ENSG00000155970-MICU3 [tissue]
Peptide AtlasQ86XE3
HPRD13264
IPIIPI00329209   IPI00983867   IPI00982794   
Protein Interaction databases
DIP (DOE-UCLA)Q86XE3
IntAct (EBI)Q86XE3
FunCoupENSG00000155970
BioGRIDMICU3
STRING (EMBL)MICU3
ZODIACMICU3
Ontologies - Pathways
QuickGOQ86XE3
Ontology : AmiGOcalcium ion binding  mitochondrial inner membrane  mitochondrial calcium ion transmembrane transport  integral component of membrane  
Ontology : EGO-EBIcalcium ion binding  mitochondrial inner membrane  mitochondrial calcium ion transmembrane transport  integral component of membrane  
NDEx NetworkMICU3
Atlas of Cancer Signalling NetworkMICU3
Wikipedia pathwaysMICU3
Orthology - Evolution
OrthoDB286097
GeneTree (enSembl)ENSG00000155970
Phylogenetic Trees/Animal Genes : TreeFamMICU3
HOGENOMQ86XE3
Homologs : HomoloGeneMICU3
Homology/Alignments : Family Browser (UCSC)MICU3
Gene fusions - Rearrangements
Fusion : QuiverMICU3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMICU3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MICU3
dbVarMICU3
ClinVarMICU3
1000_GenomesMICU3 
Exome Variant ServerMICU3
ExAC (Exome Aggregation Consortium)ENSG00000155970
GNOMAD BrowserENSG00000155970
Varsome BrowserMICU3
Genetic variants : HAPMAP286097
Genomic Variants (DGV)MICU3 [DGVbeta]
DECIPHERMICU3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMICU3 
Mutations
ICGC Data PortalMICU3 
TCGA Data PortalMICU3 
Broad Tumor PortalMICU3
OASIS PortalMICU3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMICU3
BioMutasearch MICU3
DgiDB (Drug Gene Interaction Database)MICU3
DoCM (Curated mutations)MICU3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MICU3 (select a term)
intoGenMICU3
Cancer3DMICU3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610633   
Orphanet
DisGeNETMICU3
MedgenMICU3
Genetic Testing Registry MICU3
NextProtQ86XE3 [Medical]
TSGene286097
GENETestsMICU3
Target ValidationMICU3
Huge Navigator MICU3 [HugePedia]
snp3D : Map Gene to Disease286097
BioCentury BCIQMICU3
ClinGenMICU3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286097
Chemical/Pharm GKB GenePA134953154
Clinical trialMICU3
Miscellaneous
canSAR (ICR)MICU3 (select the gene name)
DataMed IndexMICU3
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMICU3
EVEXMICU3
GoPubMedMICU3
iHOPMICU3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:52:13 CEST 2019
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