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MIR205HG (MIR205 host gene)

Identity

Alias (NCBI)LINC00510
NPC-A-5
HGNC (Hugo) MIR205HG
HGNC Alias symbLINC00510
HGNC Alias namelong intergenic non-protein coding RNA 510
HGNC Previous nameMIR205 host gene (non-protein coding)
LocusID (NCBI) 642587
Atlas_Id 57935
Location 1q32.2  [Link to chromosome band 1q32]
Location_base_pair Starts at 209428820 and ends at 209432547 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MIR205HG (1q32.2) / PAPPA (9q33.1)TCAM1P (17q23.3) / MIR205HG (1q32.2)UTP6 (17q11.2) / MIR205HG (1q32.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR205HG   43562
Cards
Entrez_Gene (NCBI)MIR205HG  642587  MIR205 host gene
AliasesLINC00510; NPC-A-5
GeneCards (Weizmann)MIR205HG
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:209428820-209432547 [Contig_View]  MIR205HG [Vega]
TCGA cBioPortalMIR205HG
AceView (NCBI)MIR205HG
Genatlas (Paris)MIR205HG
WikiGenes642587
SOURCE (Princeton)MIR205HG
Genetics Home Reference (NIH)MIR205HG
miRBaseMIR205HG
dbDEMCMIR205HG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR205HG  -     chr1:209428820-209432547 +  1q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR205HG  -     1q32.2   [Description]    (hg19-Feb_2009)
GoldenPathMIR205HG - 1q32.2 [CytoView hg19]  MIR205HG - 1q32.2 [CytoView hg38]
genome Data Viewer NCBIMIR205HG [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK002208 AK091113 AW275825 AY320401 BC063704
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR205HG
Gene ExpressionMIR205HG [ NCBI-GEO ]   MIR205HG [ EBI - ARRAY_EXPRESS ]   MIR205HG [ SEEK ]   MIR205HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR205HG [ Firebrowse - Broad ]
GenevisibleExpression of MIR205HG in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)642587
GTEX Portal (Tissue expression)MIR205HG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR205HG
DMDM Disease mutations642587
Blocks (Seattle)MIR205HG
IPIIPI00385356   IPI00807377   
Protein Interaction databases
BioGRIDMIR205HG
STRING (EMBL)MIR205HG
ZODIACMIR205HG
Ontologies - Pathways
Huge Navigator MIR205HG [HugePedia]
snp3D : Map Gene to Disease642587
BioCentury BCIQMIR205HG
ClinGenMIR205HG
Clinical trials, drugs, therapy
Protein Interactions : CTD642587
Clinical trialMIR205HG
Miscellaneous
canSAR (ICR)MIR205HG (select the gene name)
HarmonizomeMIR205HG
DataMed IndexMIR205HG
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR205HG
EVEXMIR205HG
GoPubMedMIR205HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 14 14:20:54 CEST 2020

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