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MIR4516 (microRNA 4516)

Identity

Alias_symbol (synonym)hsa-mir-4516
Other aliasmir-4516
HGNC (Hugo) MIR4516
LocusID (NCBI) 100616258
Atlas_Id 58017
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2133119 and ends at 2133204 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR4516   41617
Cards
Entrez_Gene (NCBI)MIR4516  100616258  microRNA 4516
Aliasesmir-4516
GeneCards (Weizmann)MIR4516
Ensembl hg19 (Hinxton)ENSG00000265867 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265867 [Gene_View]  ENSG00000265867 [Sequence]  chr16:2133119-2133204 [Contig_View]  MIR4516 [Vega]
ICGC DataPortalENSG00000265867
TCGA cBioPortalMIR4516
AceView (NCBI)MIR4516
Genatlas (Paris)MIR4516
WikiGenes100616258
SOURCE (Princeton)MIR4516
Genetics Home Reference (NIH)MIR4516
miRBaseMIR4516
dbDEMCMIR4516
Genomic and cartography
GoldenPath hg38 (UCSC)MIR4516  -     chr16:2133119-2133204 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR4516  -     16p13.3   [Description]    (hg19-Feb_2009)
GoldenPathMIR4516 - 16p13.3 [CytoView hg19]  MIR4516 - 16p13.3 [CytoView hg38]
Genome Data Viewer NCBIMIR4516 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)LM611342
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NG_008617 NT_187607
Consensus coding sequences : CCDS (NCBI)MIR4516
Alternative Splicing GalleryENSG00000265867
Gene ExpressionMIR4516 [ NCBI-GEO ]   MIR4516 [ EBI - ARRAY_EXPRESS ]   MIR4516 [ SEEK ]   MIR4516 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR4516 [ Firebrowse - Broad ]
GenevisibleExpression of MIR4516 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100616258
GTEX Portal (Tissue expression)MIR4516
Human Protein AtlasENSG00000265867-MIR4516 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR4516
DMDM Disease mutations100616258
Human Protein Atlas [tissue]ENSG00000265867-MIR4516 [tissue]
Protein Interaction databases
FunCoupENSG00000265867
BioGRIDMIR4516
STRING (EMBL)MIR4516
ZODIACMIR4516
Ontologies - Pathways
snp3D : Map Gene to Disease100616258
BioCentury BCIQMIR4516
ClinGenMIR4516
Clinical trials, drugs, therapy
Protein Interactions : CTD100616258
Clinical trialMIR4516
Miscellaneous
canSAR (ICR)MIR4516 (select the gene name)
HarmonizomeMIR4516
DataMed IndexMIR4516
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR4516
EVEXMIR4516
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Jul 11 19:59:21 CEST 2020

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