Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR6501 (microRNA 6501)

Identity

Alias (NCBI)hsa-mir-6501
mir-6501
HGNC (Hugo) MIR6501
HGNC Alias symbhsa-mir-6501
LocusID (NCBI) 102465248
Atlas_Id 69981
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 33550662 and ends at 33550728 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6501   50033
Cards
Entrez_Gene (NCBI)MIR6501  102465248  microRNA 6501
Aliaseshsa-mir-6501; mir-6501
GeneCards (Weizmann)MIR6501
Ensembl hg19 (Hinxton)ENSG00000284448 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000284448 [Gene_View]  ENSG00000284448 [Sequence]  chr21:33550662-33550728 [Contig_View]  MIR6501 [Vega]
ICGC DataPortalENSG00000284448
TCGA cBioPortalMIR6501
AceView (NCBI)MIR6501
Genatlas (Paris)MIR6501
WikiGenes102465248
SOURCE (Princeton)MIR6501
Genetics Home Reference (NIH)MIR6501
miRBaseMIR6501
dbDEMCMIR6501
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6501  -     chr21:33550662-33550728 +  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6501  -     21q22.11   [Description]    (hg19-Feb_2009)
GoldenPathMIR6501 - 21q22.11 [CytoView hg19]  MIR6501 - 21q22.11 [CytoView hg38]
ImmunoBaseENSG00000284448
genome Data Viewer NCBIMIR6501 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)LM611744
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6501
Alternative Splicing GalleryENSG00000284448
Gene ExpressionMIR6501 [ NCBI-GEO ]   MIR6501 [ EBI - ARRAY_EXPRESS ]   MIR6501 [ SEEK ]   MIR6501 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6501 [ Firebrowse - Broad ]
GenevisibleExpression of MIR6501 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102465248
GTEX Portal (Tissue expression)MIR6501
Human Protein AtlasENSG00000284448-MIR6501 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6501
DMDM Disease mutations102465248
Blocks (Seattle)MIR6501
Human Protein Atlas [tissue]ENSG00000284448-MIR6501 [tissue]
Protein Interaction databases
FunCoupENSG00000284448
BioGRIDMIR6501
STRING (EMBL)MIR6501
ZODIACMIR6501
Ontologies - Pathways
Huge Navigator MIR6501 [HugePedia]
snp3D : Map Gene to Disease102465248
BioCentury BCIQMIR6501
ClinGenMIR6501
Clinical trials, drugs, therapy
Protein Interactions : CTD102465248
Clinical trialMIR6501
Miscellaneous
canSAR (ICR)MIR6501 (select the gene name)
HarmonizomeMIR6501
DataMed IndexMIR6501
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6501
EVEXMIR6501
GoPubMedMIR6501
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jul 16 16:17:00 CEST 2020

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