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MSANTD3-TMEFF1 (MSANTD3-TMEFF1 readthrough)

Identity

Alias (NCBI)C9orf2
C9orf3-TMEFF1
C9orf30-TMEFF1
H7365
TMEFF1
TR-1
HGNC (Hugo) MSANTD3-TMEFF1
HGNC Previous nameC9orf30-TMEFF1
HGNC Previous nameC9orf30-TMEFF1 readthrough
LocusID (NCBI) 100526694
Atlas_Id 70515
Location 9q31.1  [Link to chromosome band 9q31]
Location_base_pair Starts at 100441906 and ends at 100577636 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MSANTD3-TMEFF1 (9q31.1) / MURC (9q31.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MSANTD3-TMEFF1   38838
Cards
Entrez_Gene (NCBI)MSANTD3-TMEFF1  100526694  MSANTD3-TMEFF1 readthrough
AliasesC9orf2; C9orf3-TMEFF1; C9orf30-TMEFF1; H7365; 
TMEFF1; TR-1
GeneCards (Weizmann)MSANTD3-TMEFF1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr9:100441906-100577636 [Contig_View]  MSANTD3-TMEFF1 [Vega]
TCGA cBioPortalMSANTD3-TMEFF1
AceView (NCBI)MSANTD3-TMEFF1
Genatlas (Paris)MSANTD3-TMEFF1
WikiGenes100526694
SOURCE (Princeton)MSANTD3-TMEFF1
Genetics Home Reference (NIH)MSANTD3-TMEFF1
Genomic and cartography
GoldenPath hg38 (UCSC)MSANTD3-TMEFF1  -     chr9:100441906-100577636 +  9q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MSANTD3-TMEFF1  -     9q31.1   [Description]    (hg19-Feb_2009)
GoldenPathMSANTD3-TMEFF1 - 9q31.1 [CytoView hg19]  MSANTD3-TMEFF1 - 9q31.1 [CytoView hg38]
genome Data Viewer NCBIMSANTD3-TMEFF1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL831919
RefSeq transcript (Entrez)NM_001198812
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MSANTD3-TMEFF1
Gene ExpressionMSANTD3-TMEFF1 [ NCBI-GEO ]   MSANTD3-TMEFF1 [ EBI - ARRAY_EXPRESS ]   MSANTD3-TMEFF1 [ SEEK ]   MSANTD3-TMEFF1 [ MEM ]
Gene Expression Viewer (FireBrowse)MSANTD3-TMEFF1 [ Firebrowse - Broad ]
GenevisibleExpression of MSANTD3-TMEFF1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100526694
GTEX Portal (Tissue expression)MSANTD3-TMEFF1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MSANTD3-TMEFF1
DMDM Disease mutations100526694
Blocks (Seattle)MSANTD3-TMEFF1
Protein Interaction databases
BioGRIDMSANTD3-TMEFF1
STRING (EMBL)MSANTD3-TMEFF1
ZODIACMSANTD3-TMEFF1
Ontologies - Pathways
Huge Navigator MSANTD3-TMEFF1 [HugePedia]
snp3D : Map Gene to Disease100526694
BioCentury BCIQMSANTD3-TMEFF1
ClinGenMSANTD3-TMEFF1
Clinical trials, drugs, therapy
Protein Interactions : CTD100526694
Clinical trialMSANTD3-TMEFF1
Miscellaneous
canSAR (ICR)MSANTD3-TMEFF1 (select the gene name)
HarmonizomeMSANTD3-TMEFF1
DataMed IndexMSANTD3-TMEFF1
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMSANTD3-TMEFF1
EVEXMSANTD3-TMEFF1
GoPubMedMSANTD3-TMEFF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:18:44 CEST 2020

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