Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MTLN (mitoregulin)

Identity

Other aliasLINC00116
MOXI
NCRNA00116
SMIM37
HGNC (Hugo) MTLN
LocusID (NCBI) 205251
Atlas_Id 80372
Location 2q13  [Link to chromosome band 2q13]
Location_base_pair Starts at 110211526 and ends at 110245420 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MTLN   27339
Cards
Entrez_Gene (NCBI)MTLN  205251  mitoregulin
AliasesLINC00116; MOXI; NCRNA00116; SMIM37
GeneCards (Weizmann)MTLN
Ensembl hg19 (Hinxton)ENSG00000175701 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175701 [Gene_View]  ENSG00000175701 [Sequence]  chr2:110211526-110245420 [Contig_View]  MTLN [Vega]
ICGC DataPortalENSG00000175701
TCGA cBioPortalMTLN
AceView (NCBI)MTLN
Genatlas (Paris)MTLN
WikiGenes205251
SOURCE (Princeton)MTLN
Genetics Home Reference (NIH)MTLN
Genomic and cartography
GoldenPath hg38 (UCSC)MTLN  -     chr2:110211526-110245420 -  2q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTLN  -     2q13   [Description]    (hg19-Feb_2009)
GoldenPathMTLN - 2q13 [CytoView hg19]  MTLN - 2q13 [CytoView hg38]
ImmunoBaseENSG00000175701
Mapping of homologs : NCBIMTLN [Mapview hg19]  MTLN [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF504645 BC031315 BC064430 BC133660 H50192
RefSeq transcript (Entrez)NM_001355251
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MTLN
Cluster EST : UnigeneHs.128499 [ NCBI ]
CGAP (NCI)Hs.128499
Alternative Splicing GalleryENSG00000175701
Gene ExpressionMTLN [ NCBI-GEO ]   MTLN [ EBI - ARRAY_EXPRESS ]   MTLN [ SEEK ]   MTLN [ MEM ]
Gene Expression Viewer (FireBrowse)MTLN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)205251
GTEX Portal (Tissue expression)MTLN
Human Protein AtlasENSG00000175701-MTLN [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCU8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCU8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCU8
Splice isoforms : SwissVarQ8NCU8
PhosPhoSitePlusQ8NCU8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MTLN
DMDM Disease mutations205251
Blocks (Seattle)MTLN
SuperfamilyQ8NCU8
Human Protein Atlas [tissue]ENSG00000175701-MTLN [tissue]
Peptide AtlasQ8NCU8
IPIIPI00168462   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCU8
IntAct (EBI)Q8NCU8
FunCoupENSG00000175701
BioGRIDMTLN
STRING (EMBL)MTLN
ZODIACMTLN
Ontologies - Pathways
QuickGOQ8NCU8
Ontology : AmiGOpositive regulation of mitochondrial membrane potential  integral component of mitochondrial inner membrane  positive regulation of protein complex assembly  positive regulation of sequestering of calcium ion  
Ontology : EGO-EBIpositive regulation of mitochondrial membrane potential  integral component of mitochondrial inner membrane  positive regulation of protein complex assembly  positive regulation of sequestering of calcium ion  
NDEx NetworkMTLN
Atlas of Cancer Signalling NetworkMTLN
Wikipedia pathwaysMTLN
Orthology - Evolution
OrthoDB205251
GeneTree (enSembl)ENSG00000175701
Phylogenetic Trees/Animal Genes : TreeFamMTLN
HOGENOMQ8NCU8
Homologs : HomoloGeneMTLN
Homology/Alignments : Family Browser (UCSC)MTLN
Gene fusions - Rearrangements
Fusion : QuiverMTLN
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTLN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTLN
dbVarMTLN
ClinVarMTLN
1000_GenomesMTLN 
Exome Variant ServerMTLN
ExAC (Exome Aggregation Consortium)ENSG00000175701
GNOMAD BrowserENSG00000175701
Varsome BrowserMTLN
Genetic variants : HAPMAP205251
Genomic Variants (DGV)MTLN [DGVbeta]
DECIPHERMTLN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTLN 
Mutations
ICGC Data PortalMTLN 
TCGA Data PortalMTLN 
Broad Tumor PortalMTLN
OASIS PortalMTLN [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMTLN
BioMutasearch MTLN
DgiDB (Drug Gene Interaction Database)MTLN
DoCM (Curated mutations)MTLN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTLN (select a term)
intoGenMTLN
Cancer3DMTLN(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMTLN
MedgenMTLN
Genetic Testing Registry MTLN
NextProtQ8NCU8 [Medical]
TSGene205251
GENETestsMTLN
Target ValidationMTLN
Huge Navigator MTLN [HugePedia]
snp3D : Map Gene to Disease205251
BioCentury BCIQMTLN
ClinGenMTLN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD205251
Chemical/Pharm GKB GenePA164723669
Clinical trialMTLN
Miscellaneous
canSAR (ICR)MTLN (select the gene name)
DataMed IndexMTLN
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTLN
EVEXMTLN
GoPubMedMTLN
iHOPMTLN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:57:02 CEST 2019

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