| Nomenclature |
|---|
| HGNC (Hugo) | NAB1 7626 |
| Cards |
|---|
| Entrez_Gene (NCBI) | NAB1 4664 NGFI-A binding protein 1 |
| Aliases | |
| GeneCards (Weizmann) | NAB1 |
| Ensembl hg19 (Hinxton) | ENSG00000138386 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000138386 [Gene_View] ENSG00000138386 [Sequence] chr2:190649122-190692766 [Contig_View] NAB1 [Vega] |
| ICGC DataPortal | ENSG00000138386 |
| TCGA cBioPortal | NAB1 |
| AceView (NCBI) | NAB1 |
| Genatlas (Paris) | NAB1 |
| WikiGenes | 4664 |
| SOURCE (Princeton) | NAB1 |
| Genetics Home Reference (NIH) | NAB1 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | NAB1 - chr2:190649122-190692766 + 2q32.2 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | NAB1 - 2q32.2 [Description] (hg19-Feb_2009) |
| GoldenPath | NAB1 - 2q32.2 [CytoView hg19] NAB1 - 2q32.2 [CytoView hg38] |
| ImmunoBase | ENSG00000138386 |
| Mapping of homologs : NCBI | NAB1 [Mapview hg19] NAB1 [Mapview hg38] |
| OMIM | 600800 |
| Gene and transcription |
|---|
| Genbank (Entrez) | AF045451 AF045452 AK292446 AK296549 AK313542 |
| RefSeq transcript (Entrez) | NM_001321312 NM_001321313 NM_001321314 NM_001321315 NM_005966 |
| RefSeq genomic (Entrez) | |
| Consensus coding sequences : CCDS (NCBI) | NAB1 |
| Cluster EST : Unigene | Hs.107474 [ NCBI ] |
| CGAP (NCI) | Hs.107474 |
| Alternative Splicing Gallery | ENSG00000138386 |
| Gene Expression | NAB1 [ NCBI-GEO ] NAB1 [ EBI - ARRAY_EXPRESS ]
NAB1 [ SEEK ] NAB1 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | NAB1 [ Firebrowse - Broad ] |
| SOURCE (Princeton) | Expression in : [Datasets] [Normal Tissue Atlas] [carcinoma Classsification] [NCI60] |
| Genevestigator | Expression in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 4664 |
| GTEX Portal (Tissue expression) | NAB1 |
| Human Protein Atlas | ENSG00000138386-NAB1 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | Q13506 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | Q13506 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | Q13506 |
| Splice isoforms : SwissVar | Q13506 |
| PhosPhoSitePlus | Q13506 |
| Domains : Interpro (EBI) | Nab1_C NAB_co-repressor_dom Nab_N NCD2_sf |
| Domain families : Pfam (Sanger) | Nab1 (PF04902) NCD1 (PF04904) NCD2 (PF04905) |
| Domain families : Pfam (NCBI) | pfam04902 pfam04904 pfam04905 |
| Domain structure : Prodom (Prabi Lyon) | Nab_N (PD342192) |
| Conserved Domain (NCBI) | NAB1 |
| DMDM Disease mutations | 4664 |
| Blocks (Seattle) | NAB1 |
| PDB (RSDB) | 2YUF |
| PDB Europe | 2YUF |
| PDB (PDBSum) | 2YUF |
| PDB (IMB) | 2YUF |
| Structural Biology KnowledgeBase | 2YUF |
| SCOP (Structural Classification of Proteins) | 2YUF |
| CATH (Classification of proteins structures) | 2YUF |
| Superfamily | Q13506 |
| Human Protein Atlas [tissue] | ENSG00000138386-NAB1 [tissue] |
| Peptide Atlas | Q13506 |
| HPRD | 02881 |
| IPI | IPI00336119 IPI00220133 IPI00939230 IPI01026105 IPI00916539 IPI00916862 IPI00917111 IPI00916943 IPI00917438 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | Q13506 |
| IntAct (EBI) | Q13506 |
| FunCoup | ENSG00000138386 |
| BioGRID | NAB1 |
| STRING (EMBL) | NAB1 |
| ZODIAC | NAB1 |
| Ontologies - Pathways |
|---|
| QuickGO | Q13506 |
| Ontology : AmiGO | endochondral ossification transcription coregulator activity nucleus nucleus regulation of transcription, DNA-templated regulation of transcription, DNA-templated transcription factor binding Schwann cell differentiation myelination regulation of epidermis development negative regulation of transcription, DNA-templated |
| Ontology : EGO-EBI | endochondral ossification transcription coregulator activity nucleus nucleus regulation of transcription, DNA-templated regulation of transcription, DNA-templated transcription factor binding Schwann cell differentiation myelination regulation of epidermis development negative regulation of transcription, DNA-templated |
| NDEx Network | NAB1 |
| Atlas of Cancer Signalling Network | NAB1 |
| Wikipedia pathways | NAB1 |
| Orthology - Evolution |
|---|
| OrthoDB | 4664 |
| GeneTree (enSembl) | ENSG00000138386 |
| Phylogenetic Trees/Animal Genes : TreeFam | NAB1 |
| HOGENOM | Q13506 |
| Homologs : HomoloGene | NAB1 |
| Homology/Alignments : Family Browser (UCSC) | NAB1 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Mitelman | LAMB3/NAB1 [1q32.2/2q32.2] [t(1;2)(q32;q32)] |
| Fusion : Mitelman | NAB1/STEAP3 [2q32.2/2q14.2] [t(2;2)(q14;q32)] |
| Fusion Portal | LAMB3 1q32.2 NAB1 2q32.2 HNSC |
| Fusion Portal | NAB1 2q32.2 STEAP3 2q14.2 SKCM |
| Fusion : Quiver | NAB1 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | NAB1 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | NAB1 |
| dbVar | NAB1 |
| ClinVar | NAB1 |
| 1000_Genomes | NAB1 |
| Exome Variant Server | NAB1 |
| ExAC (Exome Aggregation Consortium) | ENSG00000138386 |
| GNOMAD Browser | ENSG00000138386 |
| Varsome Browser | NAB1 |
| Genetic variants : HAPMAP | 4664 |
| Genomic Variants (DGV) | NAB1 [DGVbeta] |
| DECIPHER | NAB1 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | NAB1 |
| Mutations |
|---|
| ICGC Data Portal | NAB1 |
| TCGA Data Portal | NAB1 |
| Broad Tumor Portal | NAB1 |
| OASIS Portal | NAB1 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | NAB1 [overview] [genome browser] [tissue] [distribution] |
| Somatic Mutations in Cancer : COSMIC3D | NAB1 |
| Mutations and Diseases : HGMD | NAB1 |
| LOVD (Leiden Open Variation Database) | Whole genome datasets |
| LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
| LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
| BioMuta | search NAB1 |
| DgiDB (Drug Gene Interaction Database) | NAB1 |
| DoCM (Curated mutations) | NAB1 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | NAB1 (select a term) |
| intoGen | NAB1 |
| Cancer3D | NAB1(select the gene name) |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | 600800 |
| Orphanet | |
| DisGeNET | NAB1 |
| Medgen | NAB1 |
| Genetic Testing Registry | NAB1
|
| NextProt | Q13506 [Medical] |
| TSGene | 4664 |
| GENETests | NAB1 |
| Target Validation | NAB1 |
| Huge Navigator |
NAB1 [HugePedia] |
| snp3D : Map Gene to Disease | 4664 |
| BioCentury BCIQ | NAB1 |
| ClinGen | NAB1 |
| Clinical trials, drugs, therapy |
|---|
| Chemical/Protein Interactions : CTD | 4664 |
| Chemical/Pharm GKB Gene | PA31431 |
| Clinical trial | NAB1 |
| Miscellaneous |
|---|
| canSAR (ICR) | NAB1 (select the gene name) |
| DataMed Index | NAB1 |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 30 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| CoreMine | NAB1 |
| EVEX | NAB1 |
| GoPubMed | NAB1 |
| iHOP | NAB1 |
