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NIPBL-DT (NIPBL divergent transcript)

Identity

Other aliasNIPBL-AS
NIPBL-AS1
HGNC (Hugo) NIPBL-DT
LocusID (NCBI) 646719
Atlas_Id 80441
Location 5p13.2  [Link to chromosome band 5p13]
Location_base_pair Starts at 36871361 and ends at 36876694 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NIPBL-DT   51293
Cards
Entrez_Gene (NCBI)NIPBL-DT  646719  NIPBL divergent transcript
AliasesNIPBL-AS; NIPBL-AS1
GeneCards (Weizmann)NIPBL-DT
Ensembl hg19 (Hinxton)ENSG00000285967 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000285967 [Gene_View]  ENSG00000285967 [Sequence]  chr5:36871361-36876694 [Contig_View]  NIPBL-DT [Vega]
ICGC DataPortalENSG00000285967
TCGA cBioPortalNIPBL-DT
AceView (NCBI)NIPBL-DT
Genatlas (Paris)NIPBL-DT
WikiGenes646719
SOURCE (Princeton)NIPBL-DT
Genetics Home Reference (NIH)NIPBL-DT
Genomic and cartography
GoldenPath hg38 (UCSC)NIPBL-DT  -     chr5:36871361-36876694 -  5p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NIPBL-DT  -     5p13.2   [Description]    (hg19-Feb_2009)
GoldenPathNIPBL-DT - 5p13.2 [CytoView hg19]  NIPBL-DT - 5p13.2 [CytoView hg38]
ImmunoBaseENSG00000285967
Mapping of homologs : NCBINIPBL-DT [Mapview hg19]  NIPBL-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI800212 AK000901
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NIPBL-DT
Cluster EST : UnigeneHs.355684 [ NCBI ]
CGAP (NCI)Hs.355684
Alternative Splicing GalleryENSG00000285967
Gene ExpressionNIPBL-DT [ NCBI-GEO ]   NIPBL-DT [ EBI - ARRAY_EXPRESS ]   NIPBL-DT [ SEEK ]   NIPBL-DT [ MEM ]
Gene Expression Viewer (FireBrowse)NIPBL-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646719
GTEX Portal (Tissue expression)NIPBL-DT
Human Protein AtlasENSG00000285967-NIPBL-DT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NIPBL-DT
DMDM Disease mutations646719
Blocks (Seattle)NIPBL-DT
Human Protein Atlas [tissue]ENSG00000285967-NIPBL-DT [tissue]
Protein Interaction databases
FunCoupENSG00000285967
BioGRIDNIPBL-DT
STRING (EMBL)NIPBL-DT
ZODIACNIPBL-DT
Ontologies - Pathways
Huge Navigator NIPBL-DT [HugePedia]
snp3D : Map Gene to Disease646719
BioCentury BCIQNIPBL-DT
ClinGenNIPBL-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646719
Clinical trialNIPBL-DT
Miscellaneous
canSAR (ICR)NIPBL-DT (select the gene name)
DataMed IndexNIPBL-DT
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNIPBL-DT
EVEXNIPBL-DT
GoPubMedNIPBL-DT
iHOPNIPBL-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:57:47 CEST 2019

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