Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NKX2-2-AS1 (NKX2-2 antisense RNA 1)

Identity

Alias_namesNKX2-2 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)NKX2-2AS
Other alias
HGNC (Hugo) NKX2-2-AS1
LocusID (NCBI) 100874189
Atlas_Id 57796
Location 20p11.22  [Link to chromosome band 20p11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NKX2-2-AS1   37154
Cards
Entrez_Gene (NCBI)NKX2-2-AS1  100874189  NKX2-2 antisense RNA 1
AliasesNKX2-2AS
GeneCards (Weizmann)NKX2-2-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  NKX2-2-AS1 [Vega]
TCGA cBioPortalNKX2-2-AS1
AceView (NCBI)NKX2-2-AS1
Genatlas (Paris)NKX2-2-AS1
WikiGenes100874189
SOURCE (Princeton)NKX2-2-AS1
Genetics Home Reference (NIH)NKX2-2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)NKX2-2-AS1  -  
GoldenPath hg19 (UCSC)NKX2-2-AS1  -  
GoldenPathNKX2-2-AS1 - [CytoView hg19]  NKX2-2-AS1 - [CytoView hg38]
Mapping of homologs : NCBINKX2-2-AS1 [Mapview hg19]  NKX2-2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI675189
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NKX2-2-AS1
Cluster EST : UnigeneHs.516922 [ NCBI ]
CGAP (NCI)Hs.516922
Gene ExpressionNKX2-2-AS1 [ NCBI-GEO ]   NKX2-2-AS1 [ EBI - ARRAY_EXPRESS ]   NKX2-2-AS1 [ SEEK ]   NKX2-2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)NKX2-2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874189
GTEX Portal (Tissue expression)NKX2-2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NKX2-2-AS1
DMDM Disease mutations100874189
Blocks (Seattle)NKX2-2-AS1
Protein Interaction databases
BioGRIDNKX2-2-AS1
STRING (EMBL)NKX2-2-AS1
ZODIACNKX2-2-AS1
Ontologies - Pathways
Huge Navigator NKX2-2-AS1 [HugePedia]
snp3D : Map Gene to Disease100874189
BioCentury BCIQNKX2-2-AS1
ClinGenNKX2-2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874189
Clinical trialNKX2-2-AS1
Miscellaneous
canSAR (ICR)NKX2-2-AS1 (select the gene name)
DataMed IndexNKX2-2-AS1
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNKX2-2-AS1
EVEXNKX2-2-AS1
GoPubMedNKX2-2-AS1
iHOPNKX2-2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 17:58:07 CET 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.