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NPIPB12 (nuclear pore complex interacting protein family member B12)

Identity

Other alias-
HGNC (Hugo) NPIPB12
LocusID (NCBI) 440353
Atlas_Id 80406
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 29483534 and ends at 29505874 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NPIPB12   37491
Cards
Entrez_Gene (NCBI)NPIPB12  440353  nuclear pore complex interacting protein family member B12
Aliases
GeneCards (Weizmann)NPIPB12
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr16:29483534-29505874 [Contig_View]  NPIPB12 [Vega]
TCGA cBioPortalNPIPB12
AceView (NCBI)NPIPB12
Genatlas (Paris)NPIPB12
WikiGenes440353
SOURCE (Princeton)NPIPB12
Genetics Home Reference (NIH)NPIPB12
Genomic and cartography
GoldenPath hg38 (UCSC)NPIPB12  -     chr16:29483534-29505874 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPIPB12  -     16p11.2   [Description]    (hg19-Feb_2009)
GoldenPathNPIPB12 - 16p11.2 [CytoView hg19]  NPIPB12 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBINPIPB12 [Mapview hg19]  NPIPB12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001355401
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPIPB12
Gene ExpressionNPIPB12 [ NCBI-GEO ]   NPIPB12 [ EBI - ARRAY_EXPRESS ]   NPIPB12 [ SEEK ]   NPIPB12 [ MEM ]
Gene Expression Viewer (FireBrowse)NPIPB12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440353
GTEX Portal (Tissue expression)NPIPB12
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NPIPB12
DMDM Disease mutations440353
Blocks (Seattle)NPIPB12
Protein Interaction databases
BioGRIDNPIPB12
STRING (EMBL)NPIPB12
ZODIACNPIPB12
Ontologies - Pathways
Huge Navigator NPIPB12 [HugePedia]
snp3D : Map Gene to Disease440353
BioCentury BCIQNPIPB12
ClinGenNPIPB12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440353
Clinical trialNPIPB12
Miscellaneous
canSAR (ICR)NPIPB12 (select the gene name)
DataMed IndexNPIPB12
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPIPB12
EVEXNPIPB12
GoPubMedNPIPB12
iHOPNPIPB12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:58:03 CEST 2019

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