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NPIPB2 (nuclear pore complex interacting protein family, member B2)

Identity

Other alias-
HGNC (Hugo) NPIPB2
LocusID (NCBI) 729978
Atlas_Id 80546
Location 16p13.13  [Link to chromosome band 16p13]
Location_base_pair Starts at 11927265 and ends at 11964438 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NPIPB2   37451
Cards
Entrez_Gene (NCBI)NPIPB2  729978  nuclear pore complex interacting protein family, member B2
Aliases
GeneCards (Weizmann)NPIPB2
Ensembl hg19 (Hinxton)ENSG00000234719 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234719 [Gene_View]  ENSG00000234719 [Sequence]  chr16:11927265-11964438 [Contig_View]  NPIPB2 [Vega]
ICGC DataPortalENSG00000234719
TCGA cBioPortalNPIPB2
AceView (NCBI)NPIPB2
Genatlas (Paris)NPIPB2
WikiGenes729978
SOURCE (Princeton)NPIPB2
Genetics Home Reference (NIH)NPIPB2
Genomic and cartography
GoldenPath hg38 (UCSC)NPIPB2  -     chr16:11927265-11964438 -  16p13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NPIPB2  -     16p13.13   [Description]    (hg19-Feb_2009)
GoldenPathNPIPB2 - 16p13.13 [CytoView hg19]  NPIPB2 - 16p13.13 [CytoView hg38]
ImmunoBaseENSG00000234719
Mapping of homologs : NCBINPIPB2 [Mapview hg19]  NPIPB2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG025764
RefSeq transcript (Entrez)NM_001355514
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NPIPB2
Cluster EST : UnigeneHs.730028 [ NCBI ]
CGAP (NCI)Hs.730028
Alternative Splicing GalleryENSG00000234719
Gene ExpressionNPIPB2 [ NCBI-GEO ]   NPIPB2 [ EBI - ARRAY_EXPRESS ]   NPIPB2 [ SEEK ]   NPIPB2 [ MEM ]
Gene Expression Viewer (FireBrowse)NPIPB2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729978
GTEX Portal (Tissue expression)NPIPB2
Human Protein AtlasENSG00000234719-NPIPB2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NPIPB2
DMDM Disease mutations729978
Blocks (Seattle)NPIPB2
Human Protein Atlas [tissue]ENSG00000234719-NPIPB2 [tissue]
IPIIPI00888953   IPI01009520   
Protein Interaction databases
FunCoupENSG00000234719
BioGRIDNPIPB2
STRING (EMBL)NPIPB2
ZODIACNPIPB2
Ontologies - Pathways
Huge Navigator NPIPB2 [HugePedia]
snp3D : Map Gene to Disease729978
BioCentury BCIQNPIPB2
ClinGenNPIPB2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729978
Clinical trialNPIPB2
Miscellaneous
canSAR (ICR)NPIPB2 (select the gene name)
DataMed IndexNPIPB2
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNPIPB2
EVEXNPIPB2
GoPubMedNPIPB2
iHOPNPIPB2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:58:04 CEST 2019

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