NT5C3A (5-nucleotidase, cytosolic IIIA)

2009-06-01  

Identity

HGNC
LOCATION
7p14.3
LOCUSID
ALIAS
NT5C3,P5N-1,P5N-1,PN-I,POMP,PSN1,UMPH,UMPH1,cN-III,hUMP1,p36
FUSION GENES

Other Information

Locus ID:

NCBI: 51251
MIM: 606224
HGNC: 17820
Ensembl: ENSG00000122643

Variants:

dbSNP: 51251
ClinVar: 51251
TCGA: ENSG00000122643
COSMIC: NT5C3A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000122643ENST00000381626Q9H0P0
ENSG00000122643ENST00000381626A0A090N7U2
ENSG00000122643ENST00000405342Q9H0P0
ENSG00000122643ENST00000405342A0A024RA81
ENSG00000122643ENST00000409467Q9H0P0
ENSG00000122643ENST00000409467A0A090N7U2
ENSG00000122643ENST00000409787B9A035
ENSG00000122643ENST00000449201C9K084
ENSG00000122643ENST00000456458F8WDR0
ENSG00000122643ENST00000610140X6RM59
ENSG00000122643ENST00000643244Q9H0P0
ENSG00000122643ENST00000643244A0A024RA81

Expression (GTEx)

0
50
100
150

Pathways

PathwaySourceExternal ID
Purine metabolismKEGGko00230
Pyrimidine metabolismKEGGko00240
Nicotinate and nicotinamide metabolismKEGGko00760
Purine metabolismKEGGhsa00230
Pyrimidine metabolismKEGGhsa00240
Nicotinate and nicotinamide metabolismKEGGhsa00760
Metabolic pathwaysKEGGhsa01100
MetabolismREACTOMER-HSA-1430728
Metabolism of nucleotidesREACTOMER-HSA-15869
Pyrimidine metabolismREACTOMER-HSA-73848
Pyrimidine catabolismREACTOMER-HSA-73621

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA444760Leukemia, Myeloid, AcuteDiseaseClinicalAnnotationassociatedPD25000516
PA445062NeoplasmsDiseaseClinicalAnnotationassociatedPK22838949
PA449177cytarabineChemicalClinicalAnnotationassociatedPD25000516
PA449748gemcitabineChemicalClinicalAnnotationassociatedPK22838949
PA449961idarubicinChemicalClinicalAnnotationassociatedPD25000516

References

Pubmed IDYearTitleCitations
345478762021[Two novel mutations (c.830A>G, c.252+1G>A) in NT5C3A associated with hereditary pyrimidine 5'-nucleotidase deficiency: two cases report and literature review].0
345478762021[Two novel mutations (c.830A>G, c.252+1G>A) in NT5C3A associated with hereditary pyrimidine 5'-nucleotidase deficiency: two cases report and literature review].0
309510282019A New Homozygous Mutation (c.393-394del TA/c.393-394del TA) in the NT5C3 Gene Associated With Pyrimidine-5'-Nucleotidase Deficiency: A Case Report.2
309510282019A New Homozygous Mutation (c.393-394del TA/c.393-394del TA) in the NT5C3 Gene Associated With Pyrimidine-5'-Nucleotidase Deficiency: A Case Report.2
294637772018The intracellular pyrimidine 5'-nucleotidase NT5C3A is a negative epigenetic factor in interferon and cytokine signaling.9
294637772018The intracellular pyrimidine 5'-nucleotidase NT5C3A is a negative epigenetic factor in interferon and cytokine signaling.9
273816542016Proteomics reveals reduced expression of transketolase in pyrimidine 5'-nucleotidase deficient patients.1
273816542016Proteomics reveals reduced expression of transketolase in pyrimidine 5'-nucleotidase deficient patients.1
262882492015Variability of Gene Expression Identifies Transcriptional Regulators of Early Human Embryonic Development.25
262882492015Variability of Gene Expression Identifies Transcriptional Regulators of Early Human Embryonic Development.25
250005162014NT5C3 polymorphisms and outcome of first induction chemotherapy in acute myeloid leukemia.5
251539052014Pyrimidine-5'-nucleotidase Campinas, a new mutation (p.R56G) in the NT5C3 gene associated with pyrimidine-5'-nucleotidase type I deficiency and influence of Gilbert's Syndrome on clinical expression.1
250005162014NT5C3 polymorphisms and outcome of first induction chemotherapy in acute myeloid leukemia.5
251539052014Pyrimidine-5'-nucleotidase Campinas, a new mutation (p.R56G) in the NT5C3 gene associated with pyrimidine-5'-nucleotidase type I deficiency and influence of Gilbert's Syndrome on clinical expression.1
231390152013New missense homozygous mutation (Q270Ter) in the pyrimidine 5' nucleotidase type I-related gene in two Indian families with hereditary non-spherocytic hemolytic anemia.1

Citation

Dessen P

NT5C3A (5-nucleotidase, cytosolic IIIA)

Atlas Genet Cytogenet Oncol Haematol. 2009-06-01

Online version: http://atlasgeneticsoncology.org/gene/50937/nt5c3a