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NUP50-DT (NUP50 divergent transcript)

Identity

Other aliasNUP50-AS1
HGNC (Hugo) NUP50-DT
LocusID (NCBI) 100506714
Atlas_Id 80399
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 45133758 and ends at 45152584 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NUP50-DT   50502
Cards
Entrez_Gene (NCBI)NUP50-DT  100506714  NUP50 divergent transcript
AliasesNUP50-AS1
GeneCards (Weizmann)NUP50-DT
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr22:45133758-45152584 [Contig_View]  NUP50-DT [Vega]
TCGA cBioPortalNUP50-DT
AceView (NCBI)NUP50-DT
Genatlas (Paris)NUP50-DT
WikiGenes100506714
SOURCE (Princeton)NUP50-DT
Genetics Home Reference (NIH)NUP50-DT
Genomic and cartography
GoldenPath hg38 (UCSC)NUP50-DT  -     chr22:45133758-45152584 -  22q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NUP50-DT  -     22q13.31   [Description]    (hg19-Feb_2009)
GoldenPathNUP50-DT - 22q13.31 [CytoView hg19]  NUP50-DT - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBINUP50-DT [Mapview hg19]  NUP50-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC044653
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NUP50-DT
Cluster EST : UnigeneHs.189902 [ NCBI ]
CGAP (NCI)Hs.189902
Gene ExpressionNUP50-DT [ NCBI-GEO ]   NUP50-DT [ EBI - ARRAY_EXPRESS ]   NUP50-DT [ SEEK ]   NUP50-DT [ MEM ]
Gene Expression Viewer (FireBrowse)NUP50-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506714
GTEX Portal (Tissue expression)NUP50-DT
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NUP50-DT
DMDM Disease mutations100506714
Blocks (Seattle)NUP50-DT
Protein Interaction databases
BioGRIDNUP50-DT
STRING (EMBL)NUP50-DT
ZODIACNUP50-DT
Ontologies - Pathways
Huge Navigator NUP50-DT [HugePedia]
snp3D : Map Gene to Disease100506714
BioCentury BCIQNUP50-DT
ClinGenNUP50-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506714
Clinical trialNUP50-DT
Miscellaneous
canSAR (ICR)NUP50-DT (select the gene name)
DataMed IndexNUP50-DT
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNUP50-DT
EVEXNUP50-DT
GoPubMedNUP50-DT
iHOPNUP50-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Sep 3 15:58:23 CEST 2019

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