PCDHA5 (protocadherin alpha 5)

2014-11-01 Affiliation

Identity

HGNC

PCDHA5

LOCATION

5q31.3

LOCUSID

56143

ALIAS

CNR6,CNRN6,CNRS6,CRNR6,PCDH-ALPHA5

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 56143
MIM: 606311
HGNC: 8671
Ensembl: ENSG00000204965

Variants:

dbSNP: 56143
ClinVar: 56143
TCGA: ENSG00000204965
COSMIC: PCDHA5

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000204965	ENST00000529619	Q9Y5H7
ENSG00000204965	ENST00000529859	Q9Y5H7
ENSG00000204965	ENST00000614258	Q9Y5H7

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

Citation

Dessen P

PCDHA5 (protocadherin alpha 5)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/71712/pcdha5