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PCDHG@ (protocadherin gamma cluster)

Identity

Alias_symbol (synonym)PCDH2
PCDH4
Other aliasPCDHG
HGNC (Hugo) PCDHG@
LocusID (NCBI) 56115
Atlas_Id 51409
Location 5q31.3  [Link to chromosome band 5q31]
Location_base_pair Starts at 141330685 and ends at 141512979 bp from pter
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PCDHG@   8695
Cards
Entrez_Gene (NCBI)PCDHG@  56115  protocadherin gamma cluster
AliasesPCDH2; PCDH4; PCDHG
GeneCards (Weizmann)PCDHG@
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:141330685-141512979 [Contig_View]  PCDHG@ [Vega]
TCGA cBioPortalPCDHG@
AceView (NCBI)PCDHG@
Genatlas (Paris)PCDHG@
WikiGenes56115
SOURCE (Princeton)PCDHG@
Genetics Home Reference (NIH)PCDHG@
Genomic and cartography
GoldenPath hg38 (UCSC)PCDHG@  -     chr5:141330685-141512979 -  hg38-Dec_2013   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PCDHG@  -     hg38-Dec_2013   [Description]    (hg19-Feb_2009)
GoldenPathPCDHG@ - hg38-Dec_2013 [CytoView hg19]  PCDHG@ - hg38-Dec_2013 [CytoView hg38]
Mapping of homologs : NCBIPCDHG@ [Mapview hg19]  PCDHG@ [Mapview hg38]
OMIM604968   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PCDHG@
Gene ExpressionPCDHG@ [ NCBI-GEO ]   PCDHG@ [ EBI - ARRAY_EXPRESS ]   PCDHG@ [ SEEK ]   PCDHG@ [ MEM ]
Gene Expression Viewer (FireBrowse)PCDHG@ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)56115
GTEX Portal (Tissue expression)PCDHG@
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PCDHG@
DMDM Disease mutations56115
Blocks (Seattle)PCDHG@
Protein Interaction databases
BioGRIDPCDHG@
STRING (EMBL)PCDHG@
ZODIACPCDHG@
Ontologies - Pathways
Huge Navigator PCDHG@ [HugePedia]
snp3D : Map Gene to Disease56115
BioCentury BCIQPCDHG@
ClinGenPCDHG@
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56115
Chemical/Pharm GKB GenePA35503
Clinical trialPCDHG@
Miscellaneous
canSAR (ICR)PCDHG@ (select the gene name)
DataMed IndexPCDHG@
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePCDHG@
EVEXPCDHG@
GoPubMedPCDHG@
iHOPPCDHG@
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 26 18:22:29 CEST 2019

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