PDZD4 (PDZ domain containing 4)

2016-10-01  

Identity

HGNC
PDZD4
LOCATION
Xq28
LOCUSID
57595
ALIAS
LNX5,LU1,PDZK4,PDZRN4L
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 57595
MIM: 300634
HGNC: 21167
Ensembl: ENSG00000067840

Variants:

dbSNP: 57595
ClinVar: 57595
TCGA: ENSG00000067840
COSMIC: PDZD4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000067840ENST00000164640Q76G19
ENSG00000067840ENST00000393758Q17RL8
ENSG00000067840ENST00000480650V9GYN6
ENSG00000067840ENST00000544474Q76G19

Expression (GTEx)

0
50
100
150
200
250
300
350
400
450
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
150771752004Identification of PDZK4, a novel human gene with PDZ domains, that is upregulated in synovial sarcomas.3
151386362004Identification and characterization of human PDZRN4L gene and mouse Pdzrn4l gene in silico.1

Citation

Dessen P

PDZD4 (PDZ domain containing 4)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56591/pdzd4