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PPP1R2B (PPP1R2 family member B)

Identity

Other aliasPPP1R2P3
HGNC (Hugo) PPP1R2B
LocusID (NCBI) 153743
Atlas_Id 80579
Location 5q33.3  [Link to chromosome band 5q33]
Location_base_pair Starts at 156850486 and ends at 156852528 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PPP1R2B   16318
Cards
Entrez_Gene (NCBI)PPP1R2B  153743  PPP1R2 family member B
AliasesPPP1R2P3
GeneCards (Weizmann)PPP1R2B
Ensembl hg19 (Hinxton)ENSG00000231989 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231989 [Gene_View]  ENSG00000231989 [Sequence]  chr5:156850486-156852528 [Contig_View]  PPP1R2B [Vega]
ICGC DataPortalENSG00000231989
TCGA cBioPortalPPP1R2B
AceView (NCBI)PPP1R2B
Genatlas (Paris)PPP1R2B
WikiGenes153743
SOURCE (Princeton)PPP1R2B
Genetics Home Reference (NIH)PPP1R2B
Genomic and cartography
GoldenPath hg38 (UCSC)PPP1R2B  -     chr5:156850486-156852528 +  5q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPP1R2B  -     5q33.3   [Description]    (hg19-Feb_2009)
GoldenPathPPP1R2B - 5q33.3 [CytoView hg19]  PPP1R2B - 5q33.3 [CytoView hg38]
ImmunoBaseENSG00000231989
Mapping of homologs : NCBIPPP1R2B [Mapview hg19]  PPP1R2B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC066922 JF438008
RefSeq transcript (Entrez)NM_206858
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPP1R2B
Cluster EST : UnigeneHs.567727 [ NCBI ]
CGAP (NCI)Hs.567727
Alternative Splicing GalleryENSG00000231989
Gene ExpressionPPP1R2B [ NCBI-GEO ]   PPP1R2B [ EBI - ARRAY_EXPRESS ]   PPP1R2B [ SEEK ]   PPP1R2B [ MEM ]
Gene Expression Viewer (FireBrowse)PPP1R2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)153743
GTEX Portal (Tissue expression)PPP1R2B
Human Protein AtlasENSG00000231989-PPP1R2B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NXS1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NXS1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NXS1
Splice isoforms : SwissVarQ6NXS1
PhosPhoSitePlusQ6NXS1
Domains : Interpro (EBI)PPI-2   
Domain families : Pfam (Sanger)IPP-2 (PF04979)   
Domain families : Pfam (NCBI)pfam04979   
Conserved Domain (NCBI)PPP1R2B
DMDM Disease mutations153743
Blocks (Seattle)PPP1R2B
SuperfamilyQ6NXS1
Human Protein Atlas [tissue]ENSG00000231989-PPP1R2B [tissue]
Peptide AtlasQ6NXS1
IPIIPI00410126   
Protein Interaction databases
DIP (DOE-UCLA)Q6NXS1
IntAct (EBI)Q6NXS1
FunCoupENSG00000231989
BioGRIDPPP1R2B
STRING (EMBL)PPP1R2B
ZODIACPPP1R2B
Ontologies - Pathways
QuickGOQ6NXS1
Ontology : AmiGOprotein phosphatase inhibitor activity  protein binding  glycogen metabolic process  regulation of signal transduction  negative regulation of phosphoprotein phosphatase activity  regulation of phosphoprotein phosphatase activity  
Ontology : EGO-EBIprotein phosphatase inhibitor activity  protein binding  glycogen metabolic process  regulation of signal transduction  negative regulation of phosphoprotein phosphatase activity  regulation of phosphoprotein phosphatase activity  
NDEx NetworkPPP1R2B
Atlas of Cancer Signalling NetworkPPP1R2B
Wikipedia pathwaysPPP1R2B
Orthology - Evolution
OrthoDB153743
GeneTree (enSembl)ENSG00000231989
Phylogenetic Trees/Animal Genes : TreeFamPPP1R2B
HOGENOMQ6NXS1
Homologs : HomoloGenePPP1R2B
Homology/Alignments : Family Browser (UCSC)PPP1R2B
Gene fusions - Rearrangements
Fusion : QuiverPPP1R2B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPP1R2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PPP1R2B
dbVarPPP1R2B
ClinVarPPP1R2B
1000_GenomesPPP1R2B 
Exome Variant ServerPPP1R2B
ExAC (Exome Aggregation Consortium)ENSG00000231989
GNOMAD BrowserENSG00000231989
Varsome BrowserPPP1R2B
Genetic variants : HAPMAP153743
Genomic Variants (DGV)PPP1R2B [DGVbeta]
DECIPHERPPP1R2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPP1R2B 
Mutations
ICGC Data PortalPPP1R2B 
TCGA Data PortalPPP1R2B 
Broad Tumor PortalPPP1R2B
OASIS PortalPPP1R2B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPPP1R2B
BioMutasearch PPP1R2B
DgiDB (Drug Gene Interaction Database)PPP1R2B
DoCM (Curated mutations)PPP1R2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPP1R2B (select a term)
intoGenPPP1R2B
Cancer3DPPP1R2B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPPP1R2B
MedgenPPP1R2B
Genetic Testing Registry PPP1R2B
NextProtQ6NXS1 [Medical]
TSGene153743
GENETestsPPP1R2B
Target ValidationPPP1R2B
Huge Navigator PPP1R2B [HugePedia]
snp3D : Map Gene to Disease153743
BioCentury BCIQPPP1R2B
ClinGenPPP1R2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD153743
Chemical/Pharm GKB GenePA33644
Clinical trialPPP1R2B
Miscellaneous
canSAR (ICR)PPP1R2B (select the gene name)
DataMed IndexPPP1R2B
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPP1R2B
EVEXPPP1R2B
GoPubMedPPP1R2B
iHOPPPP1R2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:01:48 CEST 2019

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