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PPP1R36 (protein phosphatase 1 regulatory subunit 36)

Identity

Alias (NCBI)C14orf50
HGNC (Hugo) PPP1R36
HGNC Previous nameC14orf50
HGNC Previous namechromosome 14 open reading frame 50
 protein phosphatase 1, regulatory subunit 36
LocusID (NCBI) 145376
Atlas_Id 72151
Location 14q23.3  [Link to chromosome band 14q23]
Location_base_pair Starts at 64549902 and ends at 64589379 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(14;19)(q23;q13) UBA2/PPP1R36
t(14;19)(q23;q13) UBA2/PPP1R36


External links

Nomenclature
HGNC (Hugo)PPP1R36   20097
Cards
Entrez_Gene (NCBI)PPP1R36    protein phosphatase 1 regulatory subunit 36
AliasesC14orf50
GeneCards (Weizmann)PPP1R36
Ensembl hg19 (Hinxton)ENSG00000165807 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165807 [Gene_View]  ENSG00000165807 [Sequence]  chr14:64549902-64589379 [Contig_View]  PPP1R36 [Vega]
ICGC DataPortalENSG00000165807
TCGA cBioPortalPPP1R36
AceView (NCBI)PPP1R36
Genatlas (Paris)PPP1R36
SOURCE (Princeton)PPP1R36
Genetics Home Reference (NIH)PPP1R36
Genomic and cartography
GoldenPath hg38 (UCSC)PPP1R36  -     chr14:64549902-64589379 +  14q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PPP1R36  -     14q23.3   [Description]    (hg19-Feb_2009)
GoldenPathPPP1R36 - 14q23.3 [CytoView hg19]  PPP1R36 - 14q23.3 [CytoView hg38]
ImmunoBaseENSG00000165807
genome Data Viewer NCBIPPP1R36 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK058044 AK130365 BC068989
RefSeq transcript (Entrez)NM_172365
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PPP1R36
Alternative Splicing GalleryENSG00000165807
Gene ExpressionPPP1R36 [ NCBI-GEO ]   PPP1R36 [ EBI - ARRAY_EXPRESS ]   PPP1R36 [ SEEK ]   PPP1R36 [ MEM ]
Gene Expression Viewer (FireBrowse)PPP1R36 [ Firebrowse - Broad ]
GenevisibleExpression of PPP1R36 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145376
GTEX Portal (Tissue expression)PPP1R36
Human Protein AtlasENSG00000165807-PPP1R36 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LQ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LQ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LQ0
Splice isoforms : SwissVarQ96LQ0
PhosPhoSitePlusQ96LQ0
Domains : Interpro (EBI)Pro_pase_1_reg_su_36   
Domain families : Pfam (Sanger)PPPI_inhib (PF14895)   
Domain families : Pfam (NCBI)pfam14895   
Conserved Domain (NCBI)PPP1R36
Blocks (Seattle)PPP1R36
SuperfamilyQ96LQ0
Human Protein Atlas [tissue]ENSG00000165807-PPP1R36 [tissue]
Peptide AtlasQ96LQ0
HPRD08505
IPIIPI00065144   IPI00980270   IPI01026583   
Protein Interaction databases
DIP (DOE-UCLA)Q96LQ0
IntAct (EBI)Q96LQ0
BioGRIDPPP1R36
STRING (EMBL)PPP1R36
ZODIACPPP1R36
Ontologies - Pathways
QuickGOQ96LQ0
Ontology : AmiGOprotein phosphatase inhibitor activity  negative regulation of phosphatase activity  negative regulation of phosphatase activity  phosphatase binding  negative regulation of phosphoprotein phosphatase activity  
Ontology : EGO-EBIprotein phosphatase inhibitor activity  negative regulation of phosphatase activity  negative regulation of phosphatase activity  phosphatase binding  negative regulation of phosphoprotein phosphatase activity  
NDEx NetworkPPP1R36
Atlas of Cancer Signalling NetworkPPP1R36
Wikipedia pathwaysPPP1R36
Orthology - Evolution
OrthoDB145376
GeneTree (enSembl)ENSG00000165807
Phylogenetic Trees/Animal Genes : TreeFamPPP1R36
HOGENOMQ96LQ0
Homologs : HomoloGenePPP1R36
Homology/Alignments : Family Browser (UCSC)PPP1R36
Gene fusions - Rearrangements
Fusion : QuiverPPP1R36
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPPP1R36 [hg38]
dbVarPPP1R36
ClinVarPPP1R36
MonarchPPP1R36
1000_GenomesPPP1R36 
Exome Variant ServerPPP1R36
GNOMAD BrowserENSG00000165807
Varsome BrowserPPP1R36
Genomic Variants (DGV)PPP1R36 [DGVbeta]
DECIPHERPPP1R36 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPPP1R36 
Mutations
ICGC Data PortalPPP1R36 
TCGA Data PortalPPP1R36 
Broad Tumor PortalPPP1R36
OASIS PortalPPP1R36 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPPP1R36  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DPPP1R36
Mutations and Diseases : HGMDPPP1R36
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PPP1R36
DgiDB (Drug Gene Interaction Database)PPP1R36
DoCM (Curated mutations)PPP1R36 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PPP1R36 (select a term)
intoGenPPP1R36
Cancer3DPPP1R36(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETPPP1R36
MedgenPPP1R36
Genetic Testing Registry PPP1R36
NextProtQ96LQ0 [Medical]
GENETestsPPP1R36
Target ValidationPPP1R36
Huge Navigator PPP1R36 [HugePedia]
ClinGenPPP1R36
Clinical trials, drugs, therapy
MyCancerGenomePPP1R36
Protein Interactions : CTD
Pharm GKB GenePA134955014
Clinical trialPPP1R36
Miscellaneous
canSAR (ICR)PPP1R36 (select the gene name)
HarmonizomePPP1R36
DataMed IndexPPP1R36
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePPP1R36
EVEXPPP1R36
GoPubMedPPP1R36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:23:18 CET 2020

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