PRDM10 (PR/SET domain 10)

2004-02-01  

Identity

HGNC
PRDM10
LOCATION
11q24.3
LOCUSID
56980
ALIAS
PFM7,TRIS
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 56980
MIM: 618319
HGNC: 13995
Ensembl: ENSG00000170325

Variants:

dbSNP: 56980
ClinVar: 56980
TCGA: ENSG00000170325
COSMIC: PRDM10

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000170325ENST00000304538Q9NQV6
ENSG00000170325ENST00000358825Q9NQV6
ENSG00000170325ENST00000360871Q9NQV6
ENSG00000170325ENST00000423662Q9NQV6
ENSG00000170325ENST00000526082Q9NQV6
ENSG00000170325ENST00000527581E9PS52
ENSG00000170325ENST00000528746E9PLV1
ENSG00000170325ENST00000531431E9PIB4
ENSG00000170325ENST00000533431E9PRS0

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
200958542010Novel breast cancer risk alleles and interaction with ionizing radiation among U.S. radiologic technologists.16
255168892015Recurrent PRDM10 gene fusions in undifferentiated pleomorphic sarcoma.10
197732792009Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity.6
313132992019Undifferentiated pleomorphic sarcomas with PRDM10 fusions have a distinct gene expression profile.2

Citation

Dessen P

PRDM10 (PR/SET domain 10)

Atlas Genet Cytogenet Oncol Haematol. 2004-02-01

Online version: http://atlasgeneticsoncology.org/gene/41832/prdm10