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PRSS40A (serine protease 40A (pseudogene))

Identity

Other aliasTISP43
HGNC (Hugo) PRSS40A
LocusID (NCBI) 150527
Atlas_Id 80588
Location 2q21.1  [Link to chromosome band 2q21]
Location_base_pair Starts at 130536570 and ends at 130549895 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)PRSS40A   37319
Cards
Entrez_Gene (NCBI)PRSS40A  150527  serine protease 40A (pseudogene)
AliasesTISP43
GeneCards (Weizmann)PRSS40A
Ensembl hg19 (Hinxton)ENSG00000183292 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183292 [Gene_View]  ENSG00000183292 [Sequence]  chr2:130536570-130549895 [Contig_View]  PRSS40A [Vega]
ICGC DataPortalENSG00000183292
TCGA cBioPortalPRSS40A
AceView (NCBI)PRSS40A
Genatlas (Paris)PRSS40A
WikiGenes150527
SOURCE (Princeton)PRSS40A
Genetics Home Reference (NIH)PRSS40A
Genomic and cartography
GoldenPath hg38 (UCSC)PRSS40A  -     chr2:130536570-130549895 -  2q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PRSS40A  -     2q21.1   [Description]    (hg19-Feb_2009)
GoldenPathPRSS40A - 2q21.1 [CytoView hg19]  PRSS40A - 2q21.1 [CytoView hg38]
ImmunoBaseENSG00000183292
Mapping of homologs : NCBIPRSS40A [Mapview hg19]  PRSS40A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY713301 BC037249 BC064385
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PRSS40A
Cluster EST : UnigeneHs.125706 [ NCBI ]
CGAP (NCI)Hs.125706
Alternative Splicing GalleryENSG00000183292
Gene ExpressionPRSS40A [ NCBI-GEO ]   PRSS40A [ EBI - ARRAY_EXPRESS ]   PRSS40A [ SEEK ]   PRSS40A [ MEM ]
Gene Expression Viewer (FireBrowse)PRSS40A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)150527
GTEX Portal (Tissue expression)PRSS40A
Human Protein AtlasENSG00000183292-PRSS40A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PRSS40A
DMDM Disease mutations150527
Blocks (Seattle)PRSS40A
Human Protein Atlas [tissue]ENSG00000183292-PRSS40A [tissue]
Protein Interaction databases
FunCoupENSG00000183292
BioGRIDPRSS40A
STRING (EMBL)PRSS40A
ZODIACPRSS40A
Ontologies - Pathways
Huge Navigator PRSS40A [HugePedia]
snp3D : Map Gene to Disease150527
BioCentury BCIQPRSS40A
ClinGenPRSS40A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150527
Clinical trialPRSS40A
Miscellaneous
canSAR (ICR)PRSS40A (select the gene name)
DataMed IndexPRSS40A
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePRSS40A
EVEXPRSS40A
GoPubMedPRSS40A
iHOPPRSS40A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:02:18 CEST 2019

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