PTX4 (pentraxin 4)

2014-11-01 Affiliation

Identity

HGNC

PTX4

LOCATION

16p13.3

LOCUSID

390667

ALIAS

C16orf38

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 390667
MIM: 613442
HGNC: 14171
Ensembl: ENSG00000251692

Variants:

dbSNP: 390667
ClinVar: 390667
TCGA: ENSG00000251692
COSMIC: PTX4

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000251692	ENST00000293922	Q96A99
ENSG00000251692	ENST00000440447	H3BSQ8
ENSG00000251692	ENST00000447419	Q96A99

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
20357257	2010	Evolution of the pentraxin family: the new entry PTX4.	0

Citation

Dessen P

PTX4 (pentraxin 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72398/ptx4