Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

QPRT (quinolinate phosphoribosyltransferase)

Identity

Alias_symbol (synonym)QPRTase
Other aliasHEL-S-90n
HGNC (Hugo) QPRT
LocusID (NCBI) 23475
Atlas_Id 72441
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 29679008 and ends at 29698699 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)QPRT   9755
Cards
Entrez_Gene (NCBI)QPRT  23475  quinolinate phosphoribosyltransferase
AliasesHEL-S-90n; QPRTase
GeneCards (Weizmann)QPRT
Ensembl hg19 (Hinxton)ENSG00000103485 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103485 [Gene_View]  ENSG00000103485 [Sequence]  chr16:29679008-29698699 [Contig_View]  QPRT [Vega]
ICGC DataPortalENSG00000103485
TCGA cBioPortalQPRT
AceView (NCBI)QPRT
Genatlas (Paris)QPRT
WikiGenes23475
SOURCE (Princeton)QPRT
Genetics Home Reference (NIH)QPRT
Genomic and cartography
GoldenPath hg38 (UCSC)QPRT  -     chr16:29679008-29698699 +  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)QPRT  -     16p11.2   [Description]    (hg19-Feb_2009)
GoldenPathQPRT - 16p11.2 [CytoView hg19]  QPRT - 16p11.2 [CytoView hg38]
ImmunoBaseENSG00000103485
genome Data Viewer NCBIQPRT [Mapview hg19]  
OMIM606248   
Gene and transcription
Genbank (Entrez)AK090801 AK293195 AL563955 BC005060 BC010033
RefSeq transcript (Entrez)NM_001318249 NM_001318250 NM_014298
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)QPRT
Alternative Splicing GalleryENSG00000103485
Gene ExpressionQPRT [ NCBI-GEO ]   QPRT [ EBI - ARRAY_EXPRESS ]   QPRT [ SEEK ]   QPRT [ MEM ]
Gene Expression Viewer (FireBrowse)QPRT [ Firebrowse - Broad ]
GenevisibleExpression of QPRT in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23475
GTEX Portal (Tissue expression)QPRT
Human Protein AtlasENSG00000103485-QPRT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15274   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15274  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15274
Splice isoforms : SwissVarQ15274
Catalytic activity : Enzyme2.4.2.19 [ Enzyme-Expasy ]   2.4.2.192.4.2.19 [ IntEnz-EBI ]   2.4.2.19 [ BRENDA ]   2.4.2.19 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ15274
Domains : Interpro (EBI)Aldolase_TIM    NadC    NadC/ModD    Nicotinate_pribotase-like_C    Quinolinate_PRibosylTase_N_sf    Quinolinate_PRibosylTrfase_C    Quinolinate_PRibosylTrfase_N   
Domain families : Pfam (Sanger)QRPTase_C (PF01729)    QRPTase_N (PF02749)   
Domain families : Pfam (NCBI)pfam01729    pfam02749   
Conserved Domain (NCBI)QPRT
DMDM Disease mutations23475
Blocks (Seattle)QPRT
PDB (RSDB)2JBM    4KWV    4KWW    5AYX    5AYY    5AYZ   
PDB Europe2JBM    4KWV    4KWW    5AYX    5AYY    5AYZ   
PDB (PDBSum)2JBM    4KWV    4KWW    5AYX    5AYY    5AYZ   
PDB (IMB)2JBM    4KWV    4KWW    5AYX    5AYY    5AYZ   
Structural Biology KnowledgeBase2JBM    4KWV    4KWW    5AYX    5AYY    5AYZ   
SCOP (Structural Classification of Proteins)2JBM    4KWV    4KWW    5AYX    5AYY    5AYZ   
CATH (Classification of proteins structures)2JBM    4KWV    4KWW    5AYX    5AYY    5AYZ   
SuperfamilyQ15274
Human Protein Atlas [tissue]ENSG00000103485-QPRT [tissue]
Peptide AtlasQ15274
HPRD06950
IPIIPI00300086   IPI00910489   IPI00853023   
Protein Interaction databases
DIP (DOE-UCLA)Q15274
IntAct (EBI)Q15274
FunCoupENSG00000103485
BioGRIDQPRT
STRING (EMBL)QPRT
ZODIACQPRT
Ontologies - Pathways
QuickGOQ15274
Ontology : AmiGOnicotinate-nucleotide diphosphorylase (carboxylating) activity  nicotinate-nucleotide diphosphorylase (carboxylating) activity  nicotinate-nucleotide diphosphorylase (carboxylating) activity  protein binding  cytoplasm  cytosol  NAD biosynthetic process  NAD biosynthetic process  NAD metabolic process  quinolinate catabolic process  quinolinate catabolic process  protein homodimerization activity  protein complex oligomerization  extracellular exosome  
Ontology : EGO-EBInicotinate-nucleotide diphosphorylase (carboxylating) activity  nicotinate-nucleotide diphosphorylase (carboxylating) activity  nicotinate-nucleotide diphosphorylase (carboxylating) activity  protein binding  cytoplasm  cytosol  NAD biosynthetic process  NAD biosynthetic process  NAD metabolic process  quinolinate catabolic process  quinolinate catabolic process  protein homodimerization activity  protein complex oligomerization  extracellular exosome  
Pathways : KEGGNicotinate and nicotinamide metabolism   
NDEx NetworkQPRT
Atlas of Cancer Signalling NetworkQPRT
Wikipedia pathwaysQPRT
Orthology - Evolution
OrthoDB23475
GeneTree (enSembl)ENSG00000103485
Phylogenetic Trees/Animal Genes : TreeFamQPRT
HOGENOMQ15274
Homologs : HomoloGeneQPRT
Homology/Alignments : Family Browser (UCSC)QPRT
Gene fusions - Rearrangements
Fusion : QuiverQPRT
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerQPRT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)QPRT
dbVarQPRT
ClinVarQPRT
1000_GenomesQPRT 
Exome Variant ServerQPRT
GNOMAD BrowserENSG00000103485
Varsome BrowserQPRT
Genetic variants : HAPMAP23475
Genomic Variants (DGV)QPRT [DGVbeta]
DECIPHERQPRT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisQPRT 
Mutations
ICGC Data PortalQPRT 
TCGA Data PortalQPRT 
Broad Tumor PortalQPRT
OASIS PortalQPRT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICQPRT  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DQPRT
Mutations and Diseases : HGMDQPRT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch QPRT
DgiDB (Drug Gene Interaction Database)QPRT
DoCM (Curated mutations)QPRT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)QPRT (select a term)
intoGenQPRT
Cancer3DQPRT(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606248   
Orphanet
DisGeNETQPRT
MedgenQPRT
Genetic Testing Registry QPRT
NextProtQ15274 [Medical]
TSGene23475
GENETestsQPRT
Target ValidationQPRT
Huge Navigator QPRT [HugePedia]
snp3D : Map Gene to Disease23475
BioCentury BCIQQPRT
ClinGenQPRT
Clinical trials, drugs, therapy
Protein Interactions : CTD23475
Pharm GKB GenePA34096
Clinical trialQPRT
Miscellaneous
canSAR (ICR)QPRT (select the gene name)
HarmonizomeQPRT
DataMed IndexQPRT
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineQPRT
EVEXQPRT
GoPubMedQPRT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jul 10 20:32:55 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.