RBM23 (RNA binding motif protein 23)

2014-11-01  

Identity

HGNC
RBM23
LOCATION
14q11.2
LOCUSID
55147
ALIAS
CAPERbeta,PP239,RNPC4
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 55147
HGNC: 20155
Ensembl: ENSG00000100461

Variants:

dbSNP: 55147
ClinVar: 55147
TCGA: ENSG00000100461
COSMIC: RBM23

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000100461ENST00000346528Q86U06
ENSG00000100461ENST00000346528A0A0S2Z5I1
ENSG00000100461ENST00000359890Q86U06
ENSG00000100461ENST00000359890A0A0S2Z5D9
ENSG00000100461ENST00000399922Q86U06
ENSG00000100461ENST00000399922A0A0S2Z5J3
ENSG00000100461ENST00000542016G3XAP0
ENSG00000100461ENST00000553876G3V2H9
ENSG00000100461ENST00000553884H0YJJ3
ENSG00000100461ENST00000554256G3V5Y2
ENSG00000100461ENST00000554618G3V3V3
ENSG00000100461ENST00000555209G3V5Z6
ENSG00000100461ENST00000555676A0A0B4J267
ENSG00000100461ENST00000555691G3V5V1
ENSG00000100461ENST00000555722G3V2B4
ENSG00000100461ENST00000556862G3V5W6
ENSG00000100461ENST00000557227G3V225
ENSG00000100461ENST00000557245H0YJN4
ENSG00000100461ENST00000557403G3V546
ENSG00000100461ENST00000557464G3V3S8
ENSG00000100461ENST00000557549G3V2B6
ENSG00000100461ENST00000557571G3V5J5

Expression (GTEx)

0
5
10
15
20
25
30
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
316860312020Structural complementarity facilitates E7820-mediated degradation of RBM39 by DCAF15.1

Citation

Dessen P

RBM23 (RNA binding motif protein 23)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72517/rbm23