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RMC1 (regulator of MON1-CCZ1)

Identity

Other aliasC18orf8
HsT2591
MIC1
Mic-1
WDR98
HGNC (Hugo) RMC1
LocusID (NCBI) 29919
Atlas_Id 80313
Location 18q11.2  [Link to chromosome band 18q11]
Location_base_pair Starts at 23503470 and ends at 23531807 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RMC1   24326
Cards
Entrez_Gene (NCBI)RMC1  29919  regulator of MON1-CCZ1
AliasesC18orf8; HsT2591; MIC1; Mic-1; 
WDR98
GeneCards (Weizmann)RMC1
Ensembl hg19 (Hinxton)ENSG00000141452 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141452 [Gene_View]  ENSG00000141452 [Sequence]  chr18:23503470-23531807 [Contig_View]  RMC1 [Vega]
ICGC DataPortalENSG00000141452
TCGA cBioPortalRMC1
AceView (NCBI)RMC1
Genatlas (Paris)RMC1
WikiGenes29919
SOURCE (Princeton)RMC1
Genetics Home Reference (NIH)RMC1
Genomic and cartography
GoldenPath hg38 (UCSC)RMC1  -     chr18:23503470-23531807 +  18q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RMC1  -     18q11.2   [Description]    (hg19-Feb_2009)
GoldenPathRMC1 - 18q11.2 [CytoView hg19]  RMC1 - 18q11.2 [CytoView hg38]
ImmunoBaseENSG00000141452
Mapping of homologs : NCBIRMC1 [Mapview hg19]  RMC1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF143536 AK027106 AK057192 AK294169 AK295246
RefSeq transcript (Entrez)NM_001276342 NM_001318707 NM_001318708 NM_001318709 NM_013326
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RMC1
Cluster EST : UnigeneHs.464779 [ NCBI ]
CGAP (NCI)Hs.464779
Alternative Splicing GalleryENSG00000141452
Gene ExpressionRMC1 [ NCBI-GEO ]   RMC1 [ EBI - ARRAY_EXPRESS ]   RMC1 [ SEEK ]   RMC1 [ MEM ]
Gene Expression Viewer (FireBrowse)RMC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29919
GTEX Portal (Tissue expression)RMC1
Human Protein AtlasENSG00000141452-RMC1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96DM3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96DM3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96DM3
Splice isoforms : SwissVarQ96DM3
PhosPhoSitePlusQ96DM3
Domains : Interpro (EBI)Mic1    WD40/YVTN_repeat-like_dom_sf    WD40_repeat_dom_sf   
Domain families : Pfam (Sanger)Mic1 (PF07035)   
Domain families : Pfam (NCBI)pfam07035   
Conserved Domain (NCBI)RMC1
DMDM Disease mutations29919
Blocks (Seattle)RMC1
SuperfamilyQ96DM3
Human Protein Atlas [tissue]ENSG00000141452-RMC1 [tissue]
Peptide AtlasQ96DM3
IPIIPI00149964   IPI00647260   IPI01011311   IPI00643380   
Protein Interaction databases
DIP (DOE-UCLA)Q96DM3
IntAct (EBI)Q96DM3
FunCoupENSG00000141452
BioGRIDRMC1
STRING (EMBL)RMC1
ZODIACRMC1
Ontologies - Pathways
QuickGOQ96DM3
Ontology : AmiGOlysosomal membrane  autophagy  regulation of autophagy  late endosome membrane  Mon1-Ccz1 complex  
Ontology : EGO-EBIlysosomal membrane  autophagy  regulation of autophagy  late endosome membrane  Mon1-Ccz1 complex  
NDEx NetworkRMC1
Atlas of Cancer Signalling NetworkRMC1
Wikipedia pathwaysRMC1
Orthology - Evolution
OrthoDB29919
GeneTree (enSembl)ENSG00000141452
Phylogenetic Trees/Animal Genes : TreeFamRMC1
HOGENOMQ96DM3
Homologs : HomoloGeneRMC1
Homology/Alignments : Family Browser (UCSC)RMC1
Gene fusions - Rearrangements
Fusion : QuiverRMC1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRMC1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RMC1
dbVarRMC1
ClinVarRMC1
1000_GenomesRMC1 
Exome Variant ServerRMC1
ExAC (Exome Aggregation Consortium)ENSG00000141452
GNOMAD BrowserENSG00000141452
Varsome BrowserRMC1
Genetic variants : HAPMAP29919
Genomic Variants (DGV)RMC1 [DGVbeta]
DECIPHERRMC1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRMC1 
Mutations
ICGC Data PortalRMC1 
TCGA Data PortalRMC1 
Broad Tumor PortalRMC1
OASIS PortalRMC1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDRMC1
BioMutasearch RMC1
DgiDB (Drug Gene Interaction Database)RMC1
DoCM (Curated mutations)RMC1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RMC1 (select a term)
intoGenRMC1
Cancer3DRMC1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETRMC1
MedgenRMC1
Genetic Testing Registry RMC1
NextProtQ96DM3 [Medical]
TSGene29919
GENETestsRMC1
Target ValidationRMC1
Huge Navigator RMC1 [HugePedia]
snp3D : Map Gene to Disease29919
BioCentury BCIQRMC1
ClinGenRMC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29919
Chemical/Pharm GKB GenePA134862561
Clinical trialRMC1
Miscellaneous
canSAR (ICR)RMC1 (select the gene name)
DataMed IndexRMC1
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRMC1
EVEXRMC1
GoPubMedRMC1
iHOPRMC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:03:16 CEST 2019

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