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RNF227 (ring finger protein 227)

Identity

Other aliasLINC02581
HGNC (Hugo) RNF227
LocusID (NCBI) 284023
Atlas_Id 80627
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7913324 and ends at 7916195 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RNF227   27571
Cards
Entrez_Gene (NCBI)RNF227  284023  ring finger protein 227
AliasesLINC02581
GeneCards (Weizmann)RNF227
Ensembl hg19 (Hinxton)ENSG00000179859 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179859 [Gene_View]  ENSG00000179859 [Sequence]  chr17:7913324-7916195 [Contig_View]  RNF227 [Vega]
ICGC DataPortalENSG00000179859
TCGA cBioPortalRNF227
AceView (NCBI)RNF227
Genatlas (Paris)RNF227
WikiGenes284023
SOURCE (Princeton)RNF227
Genetics Home Reference (NIH)RNF227
Genomic and cartography
GoldenPath hg38 (UCSC)RNF227  -     chr17:7913324-7916195 -  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNF227  -     17p13.1   [Description]    (hg19-Feb_2009)
GoldenPathRNF227 - 17p13.1 [CytoView hg19]  RNF227 - 17p13.1 [CytoView hg38]
ImmunoBaseENSG00000179859
Mapping of homologs : NCBIRNF227 [Mapview hg19]  RNF227 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091084 AK095766
RefSeq transcript (Entrez)NM_001358699
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNF227
Cluster EST : UnigeneHs.744470 [ NCBI ]
CGAP (NCI)Hs.744470
Alternative Splicing GalleryENSG00000179859
Gene ExpressionRNF227 [ NCBI-GEO ]   RNF227 [ EBI - ARRAY_EXPRESS ]   RNF227 [ SEEK ]   RNF227 [ MEM ]
Gene Expression Viewer (FireBrowse)RNF227 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284023
GTEX Portal (Tissue expression)RNF227
Human Protein AtlasENSG00000179859-RNF227 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNF227
DMDM Disease mutations284023
Blocks (Seattle)RNF227
Human Protein Atlas [tissue]ENSG00000179859-RNF227 [tissue]
IPIIPI00807373   
Protein Interaction databases
FunCoupENSG00000179859
BioGRIDRNF227
STRING (EMBL)RNF227
ZODIACRNF227
Ontologies - Pathways
Huge Navigator RNF227 [HugePedia]
snp3D : Map Gene to Disease284023
BioCentury BCIQRNF227
ClinGenRNF227
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284023
Clinical trialRNF227
Miscellaneous
canSAR (ICR)RNF227 (select the gene name)
DataMed IndexRNF227
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNF227
EVEXRNF227
GoPubMedRNF227
iHOPRNF227
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 16:03:35 CEST 2019

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