RNU6ATAC (RNA, U6atac small nuclear (U12-dependent splicing))

2014-11-01  

Identity

HGNC
RNU6ATAC
LOCATION
9q34.2
LOCUSID
100151684
ALIAS
RNU6ATAC1,U6ATAC
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 100151684
MIM: 601429
HGNC: 34017
Ensembl: ENSG00000221676

Variants:

dbSNP: 100151684
ClinVar: 100151684
TCGA: ENSG00000221676
COSMIC: RNU6ATAC

RNA/Proteins

Expression (GTEx)

0
1
2
3
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

References

Pubmed IDYearTitleCitations
275105442016U6atac snRNA stem-loop interacts with U12 p65 RNA binding protein and is functionally interchangeable with the U12 apical stem-loop III.3

Citation

Dessen P

RNU6ATAC (RNA, U6atac small nuclear (U12-dependent splicing))

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72755/rnu6atac