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SAG (S-antigen; retina and pineal gland (arrestin))

Identity

Other namesRP47
S-AG
HGNC (Hugo) SAG
LocusID (NCBI) 6295
Location 2q37.1
Location_base_pair Starts at 234216309 and ends at 234255701 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)SAG   10521
Entrez_Gene (NCBI)SAG  6295  S-antigen; retina and pineal gland (arrestin)
Cards
GeneCards (Weizmann)SAG
Ensembl (Hinxton)ENSG00000130561 [Gene_View]  chr2:234216309-234255701 [Contig_View]  SAG [Vega]
AceView (NCBI)SAG
Genatlas (Paris)SAG
SOURCE (Stanford)NM_000541
Genomic and cartography
GoldenPath (UCSC)SAG  -  2q37.1   chr2:234216309-234255701 +  2q37.1   [Description]    (hg19-Feb_2009)
EnsemblSAG - 2q37.1 [CytoView]
Mapping of homologs : NCBISAG [Mapview]
OMIM181031   258100   613758   
Gene and transcription
Genbank (Entrez)AA317634 AK302211 BC144203 BC156656 BQ636469
RefSeq transcript (SRS)NM_000541
RefSeq transcript (Entrez)NM_000541
RefSeq genomic (SRS)AC_000134 NC_000002 NC_018913 NG_009116 NT_005120 NW_001838868 NW_004078009
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NG_009116 NT_005120 NW_001838868 NW_004078009
Consensus coding sequences : CCDS (NCBI)SAG
Cluster EST : UnigeneHs.32721 [ SRS ] Hs.32721 [ NCBI ]
CGAP (NCI)Hs.32721
Alternative Splicing : Fast-db (Paris)GSHG0017291
Alternative Splicing GalleryENSG00000130561
Gene ExpressionSAG [ NCBI-GEO ]   SAG [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP10523 (SRS) P10523 (Uniprot)
NextProtP10523
With graphics : InterProP10523
Splice isoforms : SwissVarP10523(Swissvar)
Domaine pattern : Prosite (SRS)ARRESTINS (PS00295)   
Domaine pattern : Prosite (Expaxy)ARRESTINS (PS00295)   
Domains : Interpro (SRS)Arrestin    Arrestin-like_N    Arrestin_C    Arrestin_C-like    Arrestin_CS    Arrestin_N    Ig_E-set   
Domains : Interpro (EBI)Arrestin    Arrestin-like_N    Arrestin_C    Arrestin_C-like    Arrestin_CS    Arrestin_N    Ig_E-set   
Related proteins : CluSTrP10523
Domain families : Pfam (SRS)Arrestin_C (PF02752)    Arrestin_N (PF00339)   
Domain families : Pfam (Sanger)Arrestin_C (PF02752)    Arrestin_N (PF00339)   
Domain families : Pfam (NCBI)pfam02752    pfam00339   
Domain families : Smart (EMBL)Arrestin_C (SM01017)  
DMDM6295
Blocks (Seattle)P10523
Human Protein AtlasENSG00000130561
HPRD01625
IPIIPI00021353   IPI01010183   IPI00425942   IPI00385032   IPI01009239   IPI00916997   IPI00917616   IPI00916047   
Protein Interaction databases
DIP (DOE-UCLA)P10523
IntAct (EBI)P10523
FunCoupENSG00000130561
REACTOMESAG
Protein Interaction Database6295
BioGRIDSAG
InParanoidP10523
Interologous Interaction database P10523
IntegromeDBSAG
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)SAG
SNP (GeneSNP Utah)SAG
SNP : HGBaseSAG
Genetic variants : HAPMAPSAG
Somatic Mutations in Cancer : COSMICSAG 
CONAN: Copy Number AnalysisSAG 
Mutations and Diseases : HGMDSAG
OMIM181031    258100    613758   
GENETests181031    258100    613758   
Disease Genetic AssociationSAG
Huge Navigator SAG [HugePedia]  SAG [HugeCancerGEM]
Genomic VariantsSAG  SAG [DGVbeta]
snp3D : Map Gene to Disease6295
General knowledge
Homologs : HomoloGeneSAG
Homology/Alignments : Family Browser (UCSC)SAG
Phylogenetic Trees/Animal Genes : TreeFamSAG
Chemical/Protein Interactions : CTD6295
Chemical/Pharm GKB GenePA34929
Clinical trialSAG
Cancer Resource (Charite)ENSG00000130561
Ontology : AmiGOopsin binding  protein phosphatase inhibitor activity  cell surface receptor signaling pathway  visual perception  rhodopsin mediated signaling pathway  phosphoprotein binding  
Ontology : EGO-EBIopsin binding  protein phosphatase inhibitor activity  cell surface receptor signaling pathway  visual perception  rhodopsin mediated signaling pathway  phosphoprotein binding  
Pathways : BIOCARTAVisual Signal Transduction [Genes]   
Other databases
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
PubGeneSAG
iHOPSAG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:42:11 CEST 2013
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