SAMD3 (sterile alpha motif domain containing 3)

2014-11-01  

Identity

HGNC
SAMD3
LOCATION
6q23.1
LOCUSID
154075
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 154075
HGNC: 21574
Ensembl: ENSG00000164483

Variants:

dbSNP: 154075
ClinVar: 154075
TCGA: ENSG00000164483
COSMIC: SAMD3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000164483ENST00000324172Q8N6K7
ENSG00000164483ENST00000368134Q8N6K7
ENSG00000164483ENST00000437477Q8N6K7
ENSG00000164483ENST00000439090Q8N6K7
ENSG00000164483ENST00000457563Q8N6K7
ENSG00000164483ENST00000463253H0YEH9
ENSG00000164483ENST00000524930E9PPN0
ENSG00000164483ENST00000529723E9PRU9
ENSG00000164483ENST00000531544E9PS85
ENSG00000164483ENST00000532309E9PR28
ENSG00000164483ENST00000532763E9PR45

Expression (GTEx)

0
1
2
3
4
5
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
206027512010Generalist genes analysis of DNA markers associated with mathematical ability and disability reveals shared influence across ages and abilities.6
209788322011Gene-environment interaction in the etiology of mathematical ability using SNP sets.6

Citation

Dessen P

SAMD3 (sterile alpha motif domain containing 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72967/samd3