SCAMP1 (secretory carrier membrane protein 1)

2013-12-01 Affiliation

Identity

HGNC

SCAMP1

LOCATION

5q14.1

LOCUSID

9522

ALIAS

SCAMP,SCAMP37

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 9522
MIM: 606911
HGNC: 10563
Ensembl: ENSG00000085365

Variants:

dbSNP: 9522
ClinVar: 9522
TCGA: ENSG00000085365
COSMIC: SCAMP1

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000085365	ENST00000320280	A0A087WU14
ENSG00000085365	ENST00000510030	A0A087WTX8
ENSG00000085365	ENST00000511551	A0A087WZA6
ENSG00000085365	ENST00000614488	O15126
ENSG00000085365	ENST00000618166	A0A087WXB0
ENSG00000085365	ENST00000621999	O15126

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Immune System	REACTOME	R-HSA-168256
Innate Immune System	REACTOME	R-HSA-168249
Neutrophil degranulation	REACTOME	R-HSA-6798695

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
23653380	2013	Inhibition of SCAMP1 suppresses cell migration and invasion in human pancreatic and gallbladder cancer cells.	7
29497041	2018	MTSS1 and SCAMP1 cooperate to prevent invasion in breast cancer.	6
32401536	2020	Long Noncoding RNA SCAMP1 Targets miR-137/CXCL12 Axis to Boost Cell Invasion and Angiogenesis in Ovarian Cancer.	1

Citation

Dessen P

SCAMP1 (secretory carrier membrane protein 1)

Atlas Genet Cytogenet Oncol Haematol. 2013-12-01

Online version: http://atlasgeneticsoncology.org/gene/53744/scamp1