SEL1L3 (SEL1L family member 3)

2014-11-01  

Identity

HGNC
SEL1L3
LOCATION
4p15.2
LOCUSID
23231
ALIAS
Sel-1L3

Other Information

Locus ID:

NCBI: 23231
HGNC: 29108
Ensembl: ENSG00000091490

Variants:

dbSNP: 23231
ClinVar: 23231
TCGA: ENSG00000091490
COSMIC: SEL1L3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000091490ENST00000264868Q68CR1
ENSG00000091490ENST00000399878Q68CR1
ENSG00000091490ENST00000502949Q68CR1
ENSG00000091490ENST00000502949A0A024R9V3
ENSG00000091490ENST00000507618H0YA36
ENSG00000091490ENST00000510448H0Y8P8
ENSG00000091490ENST00000510880D6RCE1
ENSG00000091490ENST00000513691D6RF11
ENSG00000091490ENST00000514321H0Y9M6
ENSG00000091490ENST00000514872D6RDH1

Expression (GTEx)

0
10
20
30
40
50
60
70
80
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
174573132007Association analysis of the chromosome 4p15-p16 candidate region for bipolar disorder and schizophrenia.10

Citation

Dessen P

SEL1L3 (SEL1L family member 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73101/sel1l3