SF3B5 (splicing factor 3b subunit 5)

2014-11-01  

Identity

HGNC
LOCATION
6q24.2
LOCUSID
ALIAS
SF3b10,Ysf3

Other Information

Locus ID:

NCBI: 83443
MIM: 617847
HGNC: 21083
Ensembl: ENSG00000169976

Variants:

dbSNP: 83443
ClinVar: 83443
TCGA: ENSG00000169976
COSMIC: SF3B5

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000169976ENST00000367569Q9BWJ5

Expression (GTEx)

0
50
100
150
200
250
300
350

Pathways

PathwaySourceExternal ID
SpliceosomeKEGGko03040
SpliceosomeKEGGhsa03040
Spliceosome, U2-snRNPKEGGhsa_M00352
Spliceosome, U2-snRNPKEGGM00352
Gene ExpressionREACTOMER-HSA-74160
Processing of Capped Intron-Containing Pre-mRNAREACTOMER-HSA-72203
mRNA SplicingREACTOMER-HSA-72172
mRNA Splicing - Major PathwayREACTOMER-HSA-72163
mRNA Splicing - Minor PathwayREACTOMER-HSA-72165

Protein levels (Protein atlas)

Not detected
Low
Medium
High

Citation

Dessen P

SF3B5 (splicing factor 3b subunit 5)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73164/sf3b5