Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SIK1B (salt inducible kinase 1B (putative))

Identity

Alias (NCBI)SIK
SIK-1
SIK1
SNF1LK
HGNC (Hugo) SIK1B
LocusID (NCBI) 102724428
Atlas_Id 80644
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 43414483 and ends at 43427189 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SIK1B   52389
Cards
Entrez_Gene (NCBI)SIK1B  102724428  salt inducible kinase 1B (putative)
AliasesSIK; SIK-1; SIK1; SNF1LK
GeneCards (Weizmann)SIK1B
Ensembl hg19 (Hinxton)ENSG00000275993 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000275993 [Gene_View]  ENSG00000275993 [Sequence]  chr21:43414483-43427189 [Contig_View]  SIK1B [Vega]
ICGC DataPortalENSG00000275993
TCGA cBioPortalSIK1B
AceView (NCBI)SIK1B
Genatlas (Paris)SIK1B
WikiGenes102724428
SOURCE (Princeton)SIK1B
Genetics Home Reference (NIH)SIK1B
Genomic and cartography
GoldenPath hg38 (UCSC)SIK1B  -     chr21:43414483-43427189 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SIK1B  -     21q22.3   [Description]    (hg19-Feb_2009)
GoldenPathSIK1B - 21q22.3 [CytoView hg19]  SIK1B - 21q22.3 [CytoView hg38]
ImmunoBaseENSG00000275993
genome Data Viewer NCBISIK1B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK131076 AW207331 BC038504 HY023884
RefSeq transcript (Entrez)NM_001320643
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SIK1B
Alternative Splicing GalleryENSG00000275993
Gene ExpressionSIK1B [ NCBI-GEO ]   SIK1B [ EBI - ARRAY_EXPRESS ]   SIK1B [ SEEK ]   SIK1B [ MEM ]
Gene Expression Viewer (FireBrowse)SIK1B [ Firebrowse - Broad ]
GenevisibleExpression of SIK1B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102724428
GTEX Portal (Tissue expression)SIK1B
Human Protein AtlasENSG00000275993-SIK1B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SIK1B
DMDM Disease mutations102724428
Blocks (Seattle)SIK1B
Human Protein Atlas [tissue]ENSG00000275993-SIK1B [tissue]
Protein Interaction databases
FunCoupENSG00000275993
BioGRIDSIK1B
STRING (EMBL)SIK1B
ZODIACSIK1B
Ontologies - Pathways
Huge Navigator SIK1B [HugePedia]
snp3D : Map Gene to Disease102724428
BioCentury BCIQSIK1B
ClinGenSIK1B
Clinical trials, drugs, therapy
Protein Interactions : CTD102724428
Clinical trialSIK1B
Miscellaneous
canSAR (ICR)SIK1B (select the gene name)
HarmonizomeSIK1B
DataMed IndexSIK1B
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSIK1B
EVEXSIK1B
GoPubMedSIK1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:27:41 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.