SLC22A16 (solute carrier family 22 member 16)

2007-02-01  

Identity

HGNC
LOCATION
6q21
LOCUSID
ALIAS
CT2,FLIPT2,HEL-S-18,OAT6,OCT6,OKB1,dJ261K5.1
FUSION GENES

Other Information

Locus ID:

NCBI: 85413
MIM: 608276
HGNC: 20302
Ensembl: ENSG00000004809

Variants:

dbSNP: 85413
ClinVar: 85413
TCGA: ENSG00000004809
COSMIC: SLC22A16

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000004809ENST00000330550Q86VW1
ENSG00000004809ENST00000368919Q86VW1
ENSG00000004809ENST00000368919A0A0K0K1K9
ENSG00000004809ENST00000424139C9JU94
ENSG00000004809ENST00000434949C9JTF8
ENSG00000004809ENST00000437378C9JGT0
ENSG00000004809ENST00000451557X6RE50

Expression (GTEx)

0
5
10
15
20

Pathways

PathwaySourceExternal ID
Transmembrane transport of small moleculesREACTOMER-HSA-382551
SLC-mediated transmembrane transportREACTOMER-HSA-425407
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compoundsREACTOMER-HSA-425366
Organic cation/anion/zwitterion transportREACTOMER-HSA-549132
Organic cation transportREACTOMER-HSA-549127

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA128406956fluorouracilChemicalClinicalAnnotationassociatedPD
PA165291922doxorubicinolChemicalClinicalAnnotationassociatedPKPD17559346
PA443560Breast NeoplasmsDiseaseClinicalAnnotationassociatedPKPD17559346, 20179710, 28036387
PA449165cyclophosphamideChemicalClinicalAnnotationassociatedPD20179710, 28036387
PA449412doxorubicinChemicalClinicalAnnotationassociatedPKPD17559346, 20179710, 28036387

References

Pubmed IDYearTitleCitations
327277512020Variants of SLC22A16 Predict the Efficacy of Platinum Combination Chemotherapy in Advanced Non-small-cell Lung Cancer.4
327277512020Variants of SLC22A16 Predict the Efficacy of Platinum Combination Chemotherapy in Advanced Non-small-cell Lung Cancer.4
296980842018SLC22A16 upregulation is an independent unfavorable prognostic indicator in gastric cancer.9
296980842018SLC22A16 upregulation is an independent unfavorable prognostic indicator in gastric cancer.9
280363872016Association of ABCB1 and SLC22A16 Gene Polymorphisms with Incidence of Doxorubicin-Induced Febrile Neutropenia: A Survey of Iranian Breast Cancer Patients.11
280363872016Association of ABCB1 and SLC22A16 Gene Polymorphisms with Incidence of Doxorubicin-Induced Febrile Neutropenia: A Survey of Iranian Breast Cancer Patients.11
257727572015Organic cation transporter OCT6 mediates cisplatin uptake and resistance to cisplatin in lung cancer.12
259984642015Carnitine transporter CT2 (SLC22A16) is over-expressed in acute myeloid leukemia (AML) and target knockdown reduces growth and viability of AML cells.29
263149882015Whole-exome analysis reveals novel somatic genomic alterations associated with outcome in immunochemotherapy-treated diffuse large B-cell lymphoma.32
264990742015Transduction of Oct6 or Oct9 gene concomitant with Myc family gene induced osteoblast-like phenotypic conversion in normal human fibroblasts.14
257727572015Organic cation transporter OCT6 mediates cisplatin uptake and resistance to cisplatin in lung cancer.12
259984642015Carnitine transporter CT2 (SLC22A16) is over-expressed in acute myeloid leukemia (AML) and target knockdown reduces growth and viability of AML cells.29
263149882015Whole-exome analysis reveals novel somatic genomic alterations associated with outcome in immunochemotherapy-treated diffuse large B-cell lymphoma.32
264990742015Transduction of Oct6 or Oct9 gene concomitant with Myc family gene induced osteoblast-like phenotypic conversion in normal human fibroblasts.14
200371402010The human carnitine transporter SLC22A16 mediates high affinity uptake of the anticancer polyamine analogue bleomycin-A5.46

Citation

Dessen P

SLC22A16 (solute carrier family 22 member 16)

Atlas Genet Cytogenet Oncol Haematol. 2007-02-01

Online version: http://atlasgeneticsoncology.org/gene/46047/slc22a16