SLC22A18AS (solute carrier family 22 member 18 antisense)

2014-11-01  

Identity

HGNC
SLC22A18AS
LOCATION
11p15.4
LOCUSID
5003
ALIAS
BWR1B,BWSCR1B,ORCTL2S,SLC22A1LS,p27-BWR1B

Other Information

Locus ID:

NCBI: 5003
MIM: 603240
HGNC: 10965
Ensembl: ENSG00000254827

Variants:

dbSNP: 5003
ClinVar: 5003
TCGA: ENSG00000254827
COSMIC: SLC22A18AS

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000254827ENST00000455942Q8N1D0
ENSG00000254827ENST00000526203Q8N1D0
ENSG00000254827ENST00000625099Q8N1D0

Expression (GTEx)

0
1
2
3
4
5
6
7
8
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
187218682008Promoter characterization and regulation of expression of an imprinted gene SLC22A18AS.5
187218682008Promoter characterization and regulation of expression of an imprinted gene SLC22A18AS.5
151751152004Paternal imprinting of the SLC22A1LS gene located in the human chromosome segment 11p15.5.1

Citation

Dessen P

SLC22A18AS (solute carrier family 22 member 18 antisense)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73319/slc22a18as