SLC25A17 (solute carrier family 25 member 17)

2014-11-01  

Identity

HGNC
SLC25A17
LOCATION
22q13.2
LOCUSID
10478
ALIAS
PMP34
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10478
MIM: 606795
HGNC: 10987
Ensembl: ENSG00000100372

Variants:

dbSNP: 10478
ClinVar: 10478
TCGA: ENSG00000100372
COSMIC: SLC25A17

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000100372ENST00000263255F8WA85
ENSG00000100372ENST00000402844B0QYW5
ENSG00000100372ENST00000412879F8WCH6
ENSG00000100372ENST00000420970F8WE74
ENSG00000100372ENST00000426396F8WEC6
ENSG00000100372ENST00000427084F8WCN9
ENSG00000100372ENST00000430221F8WF87
ENSG00000100372ENST00000434185B1AHN4
ENSG00000100372ENST00000434193F2Z2I9
ENSG00000100372ENST00000435456O43808
ENSG00000100372ENST00000443810F2Z2I9
ENSG00000100372ENST00000447566F8WBA4
ENSG00000100372ENST00000449676F2Z2I9
ENSG00000100372ENST00000458600F2Z2I9
ENSG00000100372ENST00000544408F6RTR7

Expression (GTEx)

0
5
10
15
20
25
30
35
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
PeroxisomeKEGGko04146
PeroxisomeKEGGhsa04146
MetabolismREACTOMER-HSA-1430728
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
Peroxisomal lipid metabolismREACTOMER-HSA-390918
Alpha-oxidation of phytanateREACTOMER-HSA-389599

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
232661872013The mitochondrial transporter family SLC25: identification, properties and physiopathology.159
221855732012The human gene SLC25A17 encodes a peroxisomal transporter of coenzyme A, FAD and NAD+.25
124458292002Identification of human PMP34 as a peroxisomal ATP transporter.20
250024032014PEX16 contributes to peroxisome maintenance by constantly trafficking PEX3 via the ER.18

Citation

Dessen P

SLC25A17 (solute carrier family 25 member 17)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73340/slc25a17