SLC25A39 (solute carrier family 25 member 39)

2014-11-01  

Identity

HGNC
SLC25A39
LOCATION
17q21.31
LOCUSID
51629
ALIAS
CGI-69,CGI69
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 51629
MIM: 610820
HGNC: 24279
Ensembl: ENSG00000013306

Variants:

dbSNP: 51629
ClinVar: 51629
TCGA: ENSG00000013306
COSMIC: SLC25A39

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000013306ENST00000225308Q9BZJ4
ENSG00000013306ENST00000377095Q9BZJ4
ENSG00000013306ENST00000537904B4DFG5
ENSG00000013306ENST00000585523K7ELM7
ENSG00000013306ENST00000585636K7EKC2
ENSG00000013306ENST00000586016K7EMW3
ENSG00000013306ENST00000586633K7EKF4
ENSG00000013306ENST00000588049K7EJI2
ENSG00000013306ENST00000588767K7EMR4
ENSG00000013306ENST00000590194Q9BZJ4
ENSG00000013306ENST00000592857K7EQS4
ENSG00000013306ENST00000593166K7EQS8

Expression (GTEx)

0
100
200
300
400
500
600
700
800
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
232661872013The mitochondrial transporter family SLC25: identification, properties and physiopathology.159
196564902009Discovery of genes essential for heme biosynthesis through large-scale gene expression analysis.77
208776242010Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.17

Citation

Dessen P

SLC25A39 (solute carrier family 25 member 39)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73359/slc25a39