SLC31A1 (solute carrier family 31 member 1)

2009-08-01  

Identity

HGNC
LOCATION
9q32
LOCUSID
ALIAS
COPT1,CTR1

Other Information

Locus ID:

NCBI: 1317
MIM: 603085
HGNC: 11016
Ensembl: ENSG00000136868

Variants:

dbSNP: 1317
ClinVar: 1317
TCGA: ENSG00000136868
COSMIC: SLC31A1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000136868ENST00000374212O15431
ENSG00000136868ENST00000374212A0A024R824

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45

Pathways

PathwaySourceExternal ID
Mineral absorptionKEGGko04978
Mineral absorptionKEGGhsa04978
Transmembrane transport of small moleculesREACTOMER-HSA-382551
SLC-mediated transmembrane transportREACTOMER-HSA-425407
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compoundsREACTOMER-HSA-425366
Metal ion SLC transportersREACTOMER-HSA-425410
Platinum drug resistanceKEGGko01524
Platinum drug resistanceKEGGhsa01524

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA164713176Platinum compoundsChemicalClinicalAnnotation, Pathway, VariantAnnotationambiguousPD19525887
PA166123026progression-free survivalDiseaseVariantAnnotationnot associatedPD
PA166123207overall survivalDiseaseClinicalAnnotation, VariantAnnotationambiguousPD
PA443340AnemiaDiseaseClinicalAnnotationassociatedPD
PA443622Carcinoma, Non-Small-Cell LungDiseaseClinicalAnnotation, VariantAnnotationambiguousPD22516052, 22725681
PA443937Drug ToxicityDiseaseClinicalAnnotationassociatedPD
PA444773LeukopeniaDiseaseClinicalAnnotationassociatedPD
PA445048NauseaDiseaseClinicalAnnotationassociatedPD
PA445113NeutropeniaDiseaseClinicalAnnotationassociatedPD
PA445846ThrombocytopeniaDiseaseClinicalAnnotation, VariantAnnotationassociatedPD
PA446051VomitingDiseaseClinicalAnnotationassociatedPD
PA448803carboplatinChemicalClinicalAnnotationassociatedPD22725681
PA449014cisplatinChemicalClinicalAnnotationassociatedPD22516052, 22725681

References

Pubmed IDYearTitleCitations
387127352024Revealing the potential of solute carrier family 31 (copper transporters), member 1: Insights into its role in bladder cancer progression and therapeutic implications.1
387127352024Revealing the potential of solute carrier family 31 (copper transporters), member 1: Insights into its role in bladder cancer progression and therapeutic implications.1
376106682023Cuproptosis-related gene SLC31A1 expression correlates with the prognosis and tumor immune microenvironment in glioma.4
378532102023Cuproptosis-related gene SLC31A1: prognosis values and potential biological functions in cancer.2
378846502023Identification of cuproptosis-related gene SLC31A1 and upstream LncRNA-miRNA regulatory axis in breast cancer.1
376106682023Cuproptosis-related gene SLC31A1 expression correlates with the prognosis and tumor immune microenvironment in glioma.4
378532102023Cuproptosis-related gene SLC31A1: prognosis values and potential biological functions in cancer.2
378846502023Identification of cuproptosis-related gene SLC31A1 and upstream LncRNA-miRNA regulatory axis in breast cancer.1
359960752022High expression of cuproptosis-related SLC31A1 gene in relation to unfavorable outcome and deregulated immune cell infiltration in breast cancer: an analysis based on public databases.21
359960752022High expression of cuproptosis-related SLC31A1 gene in relation to unfavorable outcome and deregulated immune cell infiltration in breast cancer: an analysis based on public databases.21
334047482021Dual-mode imaging of copper transporter 1 in HepG2 cells by hyphenating confocal laser scanning microscopy with laser ablation ICPMS.1
334110332021Effects of SLC31A1 and ATP7B polymorphisms on platinum resistance in patients with esophageal squamous cell carcinoma receiving neoadjuvant chemoradiotherapy.5
334347362021Abnormalities in the copper transporter CTR1 in postmortem hippocampus in schizophrenia: A subregion and laminar analysis.4
334047482021Dual-mode imaging of copper transporter 1 in HepG2 cells by hyphenating confocal laser scanning microscopy with laser ablation ICPMS.1
334110332021Effects of SLC31A1 and ATP7B polymorphisms on platinum resistance in patients with esophageal squamous cell carcinoma receiving neoadjuvant chemoradiotherapy.5

Citation

Dessen P

SLC31A1 (solute carrier family 31 member 1)

Atlas Genet Cytogenet Oncol Haematol. 2009-08-01

Online version: http://atlasgeneticsoncology.org/gene/50996/slc31a1