SLC38A8 (solute carrier family 38 member 8)

2014-11-01 Affiliation

Identity

HGNC

SLC38A8

LOCATION

16q23.3

LOCUSID

146167

ALIAS

FVH2

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 146167
MIM: 615585
HGNC: 32434
Ensembl: ENSG00000166558

Variants:

dbSNP: 146167
ClinVar: 146167
TCGA: ENSG00000166558
COSMIC: SLC38A8

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000166558	ENST00000299709	A6NNN8
ENSG00000166558	ENST00000568178	H3BUP5
ENSG00000166558	ENST00000569816	H3BP02

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
24045842	2014	Isolated foveal hypoplasia with secondary nystagmus and low vision is associated with a homozygous SLC38A8 mutation.	14
24290379	2013	Recessive mutations in SLC38A8 cause foveal hypoplasia and optic nerve misrouting without albinism.	13
24289273	2013	Gene-environment interaction effects on lung function- a genome-wide association study within the Framingham heart study.	7

Citation

Dessen P

SLC38A8 (solute carrier family 38 member 8)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73428/slc38a8