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SNAP25 (synaptosome associated protein 25)

Identity

Alias (NCBI)CMS18
RIC-4
RIC4
SEC9
SNAP
SNAP-25
SUP
bA416N4.2
dJ1068F16.2
HGNC (Hugo) SNAP25
HGNC Alias symbSNAP-25
RIC-4
RIC4
SEC9
bA416N4.2
dJ1068F16.2
HGNC Alias nameresistance to inhibitors of cholinesterase 4 homolog
HGNC Previous nameSNAP
HGNC Previous namesynaptosomal-associated protein, 25kDa
LocusID (NCBI) 6616
Atlas_Id 50575
Location 20p12.2  [Link to chromosome band 20p12]
Location_base_pair Starts at 10218830 and ends at 10307418 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LAMA3 (18q11.2) / SNAP25 (20p12.2)RASA4 (7q22.1) / SNAP25 (20p12.2)ROR1 (1p31.3) / SNAP25 (20p12.2)
SNAP25 (20p12.2) / CREBBP (16p13.3)SNAP25 (20p12.2) / EHMT1 (9q34.3)SNAP25 (20p12.2) / IGSF9B (11q25)
SNAP25 (20p12.2) / SNAP25 (20p12.2)SNRPN (15q11.2) / SNAP25 (20p12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SNAP25   11132
Cards
Entrez_Gene (NCBI)SNAP25    synaptosome associated protein 25
AliasesCMS18; RIC-4; RIC4; SEC9; 
SNAP; SNAP-25; SUP; bA416N4.2; dJ1068F16.2
GeneCards (Weizmann)SNAP25
Ensembl hg19 (Hinxton)ENSG00000132639 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132639 [Gene_View]  ENSG00000132639 [Sequence]  chr20:10218830-10307418 [Contig_View]  SNAP25 [Vega]
ICGC DataPortalENSG00000132639
TCGA cBioPortalSNAP25
AceView (NCBI)SNAP25
Genatlas (Paris)SNAP25
SOURCE (Princeton)SNAP25
Genetics Home Reference (NIH)SNAP25
Genomic and cartography
GoldenPath hg38 (UCSC)SNAP25  -     chr20:10218830-10307418 +  20p12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNAP25  -     20p12.2   [Description]    (hg19-Feb_2009)
GoldenPathSNAP25 - 20p12.2 [CytoView hg19]  SNAP25 - 20p12.2 [CytoView hg38]
ImmunoBaseENSG00000132639
genome Data Viewer NCBISNAP25 [Mapview hg19]  
OMIM600322   616330   
Gene and transcription
Genbank (Entrez)AK026732 AK090857 AK094560 AK098347 AK098767
RefSeq transcript (Entrez)NM_001322902 NM_001322903 NM_001322904 NM_001322905 NM_001322906 NM_001322907 NM_001322908 NM_001322909 NM_001322910 NM_003081 NM_130811
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNAP25
Alternative Splicing GalleryENSG00000132639
Gene ExpressionSNAP25 [ NCBI-GEO ]   SNAP25 [ EBI - ARRAY_EXPRESS ]   SNAP25 [ SEEK ]   SNAP25 [ MEM ]
Gene Expression Viewer (FireBrowse)SNAP25 [ Firebrowse - Broad ]
GenevisibleExpression of SNAP25 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6616
GTEX Portal (Tissue expression)SNAP25
Human Protein AtlasENSG00000132639-SNAP25 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNAP25
Blocks (Seattle)SNAP25
Human Protein Atlas [tissue]ENSG00000132639-SNAP25 [tissue]
HPRD02637
IPIIPI00010470   IPI00107625   IPI00645321   
Protein Interaction databases
BioGRIDSNAP25
STRING (EMBL)SNAP25
ZODIACSNAP25
Ontologies - Pathways
Litterature
PubMed231 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSNAP25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:46:48 CET 2021

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