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SNORD79 (small nucleolar RNA, C/D box 79)

Identity

Alias (NCBI)RNU103
U79
Z22
HGNC (Hugo) SNORD79
HGNC Alias symbZ22
U79
HGNC Previous nameRNU103
HGNC Previous nameRNA, U103 small nucleolar
LocusID (NCBI) 26770
Atlas_Id 73997
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 173865350 and ends at 173865430 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD79   10100
Cards
Entrez_Gene (NCBI)SNORD79  26770  small nucleolar RNA, C/D box 79
AliasesRNU103; U79; Z22
GeneCards (Weizmann)SNORD79
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:173865350-173865430 [Contig_View]  SNORD79 [Vega]
TCGA cBioPortalSNORD79
AceView (NCBI)SNORD79
Genatlas (Paris)SNORD79
WikiGenes26770
SOURCE (Princeton)SNORD79
Genetics Home Reference (NIH)SNORD79
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD79  -     chr1:173865350-173865430 -  1q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD79  -     1q25.1   [Description]    (hg19-Feb_2009)
GoldenPathSNORD79 - 1q25.1 [CytoView hg19]  SNORD79 - 1q25.1 [CytoView hg38]
genome Data Viewer NCBISNORD79 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD79
Gene ExpressionSNORD79 [ NCBI-GEO ]   SNORD79 [ EBI - ARRAY_EXPRESS ]   SNORD79 [ SEEK ]   SNORD79 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD79 [ Firebrowse - Broad ]
GenevisibleExpression of SNORD79 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26770
GTEX Portal (Tissue expression)SNORD79
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD79
DMDM Disease mutations26770
Blocks (Seattle)SNORD79
Protein Interaction databases
BioGRIDSNORD79
STRING (EMBL)SNORD79
ZODIACSNORD79
Ontologies - Pathways
Huge Navigator SNORD79 [HugePedia]
snp3D : Map Gene to Disease26770
BioCentury BCIQSNORD79
ClinGenSNORD79
Clinical trials, drugs, therapy
Protein Interactions : CTD26770
Pharm GKB GenePA34465
Clinical trialSNORD79
Miscellaneous
canSAR (ICR)SNORD79 (select the gene name)
HarmonizomeSNORD79
DataMed IndexSNORD79
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD79
EVEXSNORD79
GoPubMedSNORD79
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:30:34 CEST 2020

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