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SNORD83A (small nucleolar RNA, C/D box 83A)

Identity

Alias (NCBI)RNU83A
U83A
HGNC (Hugo) SNORD83A
HGNC Alias symbU83A
HGNC Previous nameRNU83A
HGNC Previous nameRNA, U83A small nucleolar
LocusID (NCBI) 116937
Atlas_Id 74002
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 39315213 and ends at 39315307 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD83A   17131
Cards
Entrez_Gene (NCBI)SNORD83A  116937  small nucleolar RNA, C/D box 83A
AliasesRNU83A; U83A
GeneCards (Weizmann)SNORD83A
Ensembl hg19 (Hinxton)ENSG00000209482 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000209482 [Gene_View]  ENSG00000209482 [Sequence]  chr22:39315213-39315307 [Contig_View]  SNORD83A [Vega]
ICGC DataPortalENSG00000209482
TCGA cBioPortalSNORD83A
AceView (NCBI)SNORD83A
Genatlas (Paris)SNORD83A
WikiGenes116937
SOURCE (Princeton)SNORD83A
Genetics Home Reference (NIH)SNORD83A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD83A  -     chr22:39315213-39315307 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD83A  -     22q13.1   [Description]    (hg19-Feb_2009)
GoldenPathSNORD83A - 22q13.1 [CytoView hg19]  SNORD83A - 22q13.1 [CytoView hg38]
ImmunoBaseENSG00000209482
genome Data Viewer NCBISNORD83A [Mapview hg19]  
OMIM611070   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD83A
Alternative Splicing GalleryENSG00000209482
Gene ExpressionSNORD83A [ NCBI-GEO ]   SNORD83A [ EBI - ARRAY_EXPRESS ]   SNORD83A [ SEEK ]   SNORD83A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD83A [ Firebrowse - Broad ]
GenevisibleExpression of SNORD83A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116937
GTEX Portal (Tissue expression)SNORD83A
Human Protein AtlasENSG00000209482-SNORD83A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD83A
DMDM Disease mutations116937
Blocks (Seattle)SNORD83A
Human Protein Atlas [tissue]ENSG00000209482-SNORD83A [tissue]
Protein Interaction databases
FunCoupENSG00000209482
BioGRIDSNORD83A
STRING (EMBL)SNORD83A
ZODIACSNORD83A
Ontologies - Pathways
Huge Navigator SNORD83A [HugePedia]
snp3D : Map Gene to Disease116937
BioCentury BCIQSNORD83A
ClinGenSNORD83A
Clinical trials, drugs, therapy
Protein Interactions : CTD116937
Pharm GKB GenePA34608
Clinical trialSNORD83A
Miscellaneous
canSAR (ICR)SNORD83A (select the gene name)
HarmonizomeSNORD83A
DataMed IndexSNORD83A
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD83A
EVEXSNORD83A
GoPubMedSNORD83A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:30:35 CEST 2020

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