SP140L (SP140 nuclear body protein like)

2014-11-01  

Identity

HGNC
SP140L
LOCATION
2q37.1
LOCUSID
93349
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 93349
MIM: 617747
HGNC: 25105
Ensembl: ENSG00000185404

Variants:

dbSNP: 93349
ClinVar: 93349
TCGA: ENSG00000185404
COSMIC: SP140L

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000185404ENST00000243810U5Y3L1
ENSG00000185404ENST00000396563H7BYP4
ENSG00000185404ENST00000415673Q9H930
ENSG00000185404ENST00000444636Q9H930
ENSG00000185404ENST00000458341Q9H930

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
208006032010Investigation of genetic susceptibility factors for human longevity - a targeted nonsynonymous SNP study.12
263478952015SP140L, an Evolutionarily Recent Member of the SP100 Family, Is an Autoantigen in Primary Biliary Cirrhosis.5

Citation

Dessen P

SP140L (SP140 nuclear body protein like)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74087/sp140l