SPANXB1 (SPANX family member B1)

2009-01-01  

Identity

HGNC
SPANXB1
LOCATION
Xq27.1
LOCUSID
728695
ALIAS
B1,CT11.2,SPANX-B,SPANXB,SPANXB2,SPANXF1,SPANXF2

Other Information

Locus ID:

NCBI: 728695
MIM: 300669
HGNC: 14329
Ensembl: ENSG00000227234

Variants:

dbSNP: 728695
ClinVar: 728695
TCGA: ENSG00000227234
COSMIC: SPANXB1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000227234ENST00000449283Q9NS25

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
252294542014Epigenetic mechanisms underlying the dynamic expression of cancer-testis genes, PAGE2, -2B and SPANX-B, during mesenchymal-to-epithelial transition.5
186263162008SPANX-B and SPANX-C (Xq27 region) gene dosage analysis in Sicilian patients with melanoma.3
186263162008SPANX-B and SPANX-C (Xq27 region) gene dosage analysis in Sicilian patients with melanoma.3
200739422010SPANX gene variation in fertile and infertile males.3
200739422010SPANX gene variation in fertile and infertile males.3
173427282008A shared promoter region suggests a common ancestor for the human VCX/Y, SPANX, and CSAG gene families and the murine CYPT family.1
123934892003Gene expression and immunologic consequence of SPAN-Xb in myeloma and other hematologic malignancies.0
194175502009SPANX-B and SPANX-C (Xq27 region) gene dosage analysis in Down's syndrome subjects with undescended testes.0

Citation

Dessen P

SPANXB1 (SPANX family member B1)

Atlas Genet Cytogenet Oncol Haematol. 2009-01-01

Online version: http://atlasgeneticsoncology.org/gene/50648/spanxb1