SRM (spermidine synthase)

2017-08-01  

Identity

HGNC
LOCATION
1p36.22
LOCUSID
ALIAS
PAPT,SPDSY,SPS1,SRML1
FUSION GENES

Other Information

Locus ID:

NCBI: 6723
MIM: 182891
HGNC: 11296
Ensembl: ENSG00000116649

Variants:

dbSNP: 6723
ClinVar: 6723
TCGA: ENSG00000116649
COSMIC: SRM

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000116649ENST00000376957P19623
ENSG00000116649ENST00000459997K7EKM4
ENSG00000116649ENST00000465788K7EQ47
ENSG00000116649ENST00000487300K7ESL0
ENSG00000116649ENST00000490101K7EL89

Expression (GTEx)

0
50
100
150
200

Pathways

PathwaySourceExternal ID
Arginine and proline metabolismKEGGko00330
beta-Alanine metabolismKEGGko00410
Glutathione metabolismKEGGko00480
Arginine and proline metabolismKEGGhsa00330
beta-Alanine metabolismKEGGhsa00410
Glutathione metabolismKEGGhsa00480
Cysteine and methionine metabolismKEGGko00270
Cysteine and methionine metabolismKEGGhsa00270
Metabolic pathwaysKEGGhsa01100
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidineKEGGhsa_M00133
Methionine salvage pathwayKEGGhsa_M00034
Methionine salvage pathwayKEGGM00034
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidineKEGGM00133
MetabolismREACTOMER-HSA-1430728
Metabolism of amino acids and derivativesREACTOMER-HSA-71291
Metabolism of polyaminesREACTOMER-HSA-351202

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
175857812007Structure and mechanism of spermidine synthases.32

Citation

Dessen P

SRM (spermidine synthase)

Atlas Genet Cytogenet Oncol Haematol. 2017-08-01

Online version: http://atlasgeneticsoncology.org/gene/56929/srm