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SUGT1P4-STRA6LP-CCDC180 (SUGT1P4-STRA6LP-CCDC180 readthrough)

Identity

Other aliasLOC100499484-C9ORF174
HGNC (Hugo) SUGT1P4-STRA6LP-CCDC180
LocusID (NCBI) 57653
Atlas_Id 80415
Location 9q22.33  [Link to chromosome band 9q22]
Location_base_pair Starts at 97238426 and ends at 97377295 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SUGT1P4-STRA6LP-CCDC180   53835
Cards
Entrez_Gene (NCBI)SUGT1P4-STRA6LP-CCDC180  57653  SUGT1P4-STRA6LP-CCDC180 readthrough
AliasesLOC100499484-C9ORF174
GeneCards (Weizmann)SUGT1P4-STRA6LP-CCDC180
Ensembl hg19 (Hinxton)ENSG00000255036 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255036 [Gene_View]  ENSG00000255036 [Sequence]  chr9:97238426-97377295 [Contig_View]  SUGT1P4-STRA6LP-CCDC180 [Vega]
ICGC DataPortalENSG00000255036
TCGA cBioPortalSUGT1P4-STRA6LP-CCDC180
AceView (NCBI)SUGT1P4-STRA6LP-CCDC180
Genatlas (Paris)SUGT1P4-STRA6LP-CCDC180
WikiGenes57653
SOURCE (Princeton)SUGT1P4-STRA6LP-CCDC180
Genetics Home Reference (NIH)SUGT1P4-STRA6LP-CCDC180
Genomic and cartography
GoldenPath hg38 (UCSC)SUGT1P4-STRA6LP-CCDC180  -     chr9:97238426-97377295 +  9q22.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SUGT1P4-STRA6LP-CCDC180  -     9q22.33   [Description]    (hg19-Feb_2009)
GoldenPathSUGT1P4-STRA6LP-CCDC180 - 9q22.33 [CytoView hg19]  SUGT1P4-STRA6LP-CCDC180 - 9q22.33 [CytoView hg38]
ImmunoBaseENSG00000255036
Mapping of homologs : NCBISUGT1P4-STRA6LP-CCDC180 [Mapview hg19]  SUGT1P4-STRA6LP-CCDC180 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SUGT1P4-STRA6LP-CCDC180
Cluster EST : UnigeneHs.435629 [ NCBI ]
CGAP (NCI)Hs.435629
Alternative Splicing GalleryENSG00000255036
Gene ExpressionSUGT1P4-STRA6LP-CCDC180 [ NCBI-GEO ]   SUGT1P4-STRA6LP-CCDC180 [ EBI - ARRAY_EXPRESS ]   SUGT1P4-STRA6LP-CCDC180 [ SEEK ]   SUGT1P4-STRA6LP-CCDC180 [ MEM ]
Gene Expression Viewer (FireBrowse)SUGT1P4-STRA6LP-CCDC180 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)57653
GTEX Portal (Tissue expression)SUGT1P4-STRA6LP-CCDC180
Human Protein AtlasENSG00000255036-SUGT1P4-STRA6LP-CCDC180 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SUGT1P4-STRA6LP-CCDC180
DMDM Disease mutations57653
Blocks (Seattle)SUGT1P4-STRA6LP-CCDC180
Human Protein Atlas [tissue]ENSG00000255036-SUGT1P4-STRA6LP-CCDC180 [tissue]
IPIIPI00985083   
Protein Interaction databases
FunCoupENSG00000255036
BioGRIDSUGT1P4-STRA6LP-CCDC180
STRING (EMBL)SUGT1P4-STRA6LP-CCDC180
ZODIACSUGT1P4-STRA6LP-CCDC180
Ontologies - Pathways
Huge Navigator SUGT1P4-STRA6LP-CCDC180 [HugePedia]
snp3D : Map Gene to Disease57653
BioCentury BCIQSUGT1P4-STRA6LP-CCDC180
ClinGenSUGT1P4-STRA6LP-CCDC180
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57653
Clinical trialSUGT1P4-STRA6LP-CCDC180
Miscellaneous
canSAR (ICR)SUGT1P4-STRA6LP-CCDC180 (select the gene name)
DataMed IndexSUGT1P4-STRA6LP-CCDC180
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSUGT1P4-STRA6LP-CCDC180
EVEXSUGT1P4-STRA6LP-CCDC180
GoPubMedSUGT1P4-STRA6LP-CCDC180
iHOPSUGT1P4-STRA6LP-CCDC180
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:09:02 CEST 2019

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