SYNPR (synaptoporin)

2014-11-01  

Identity

HGNC
SYNPR
LOCATION
3p14.2
LOCUSID
132204
ALIAS
SPO
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 132204
HGNC: 16507
Ensembl: ENSG00000163630

Variants:

dbSNP: 132204
ClinVar: 132204
TCGA: ENSG00000163630
COSMIC: SYNPR

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000163630ENST00000295894Q8TBG9
ENSG00000163630ENST00000450542F8WE43
ENSG00000163630ENST00000460711B3KVD8
ENSG00000163630ENST00000465156C9J976
ENSG00000163630ENST00000468110F8WF23
ENSG00000163630ENST00000472899F8WDB8
ENSG00000163630ENST00000478300Q8TBG9
ENSG00000163630ENST00000479198C9J0A2
ENSG00000163630ENST00000498449F8WDF9

Expression (GTEx)

0
50
100
150
200
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
127405982003Tyrosine nitration of a synaptic protein synaptophysin contributes to amyloid beta-peptide-induced cholinergic dysfunction.17
251387792015Genome-wide association study of maternal and inherited effects on left-sided cardiac malformations.10
129744742003Cloning and sequence analysis of the human cDNA encoding the synaptoporin (delta), a highly conservative synaptic vesicle protein.2

Citation

Dessen P

SYNPR (synaptoporin)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74423/synpr