TAPBP (TAP binding protein)

2003-02-01  

Identity

HGNC
LOCATION
6p21.32
LOCUSID
ALIAS
NGS17,TAPA,TPN,TPSN
FUSION GENES

Other Information

Locus ID:

NCBI: 6892
MIM: 601962
HGNC: 11566
Ensembl: ENSG00000231925

Variants:

dbSNP: 6892
ClinVar: 6892
TCGA: ENSG00000231925
COSMIC: TAPBP

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000231925ENST00000426633A0A0A0MSV9
ENSG00000231925ENST00000434618O15533
ENSG00000231925ENST00000434618A0A024RCT1
ENSG00000231925ENST00000456592Q6P1N7
ENSG00000231925ENST00000467025C9JA35
ENSG00000231925ENST00000475304A2AB90
ENSG00000231925ENST00000489157A0A0A0MT98

Expression (GTEx)

0
50
100
150
200
250

Pathways

PathwaySourceExternal ID
Antigen processing and presentationKEGGko04612
Antigen processing and presentationKEGGhsa04612
Immune SystemREACTOMER-HSA-168256
Adaptive Immune SystemREACTOMER-HSA-1280218
Class I MHC mediated antigen processing & presentationREACTOMER-HSA-983169
Antigen Presentation: Folding, assembly and peptide loading of class I MHCREACTOMER-HSA-983170
Antigen processing-Cross presentationREACTOMER-HSA-1236975
ER-Phagosome pathwayREACTOMER-HSA-1236974

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA443450AsthmaDiseaseClinicalAnnotationassociatedPD23736108
PA448497aspirinChemicalClinicalAnnotationassociatedPD23736108

References

Pubmed IDYearTitleCitations
385168042024The downregulation of Tapasin in dendritic cell regulates CD8(+) T cell autophagy to hamper hepatitis B viral clearance in the induced pluripotent stem cell-derived hepatocyte organoid.0
389489302024Identification of RNA-binding protein hnRNP C targeting the 3'UTR of the TAP-associated glycoprotein tapasin in melanoma.0
385168042024The downregulation of Tapasin in dendritic cell regulates CD8(+) T cell autophagy to hamper hepatitis B viral clearance in the induced pluripotent stem cell-derived hepatocyte organoid.0
389489302024Identification of RNA-binding protein hnRNP C targeting the 3'UTR of the TAP-associated glycoprotein tapasin in melanoma.0
358583442022Genetic variation that determines TAPBP expression levels associates with the course of malaria in an HLA allotype-dependent manner.1
358583442022Genetic variation that determines TAPBP expression levels associates with the course of malaria in an HLA allotype-dependent manner.1
342444932021Exchange catalysis by tapasin exploits conserved and allele-specific features of MHC-I molecules.19
342654952021The role of MHC I protein dynamics in tapasin and TAPBPR-assisted immunopeptidome editing.10
342444932021Exchange catalysis by tapasin exploits conserved and allele-specific features of MHC-I molecules.19
342654952021The role of MHC I protein dynamics in tapasin and TAPBPR-assisted immunopeptidome editing.10
327883702020Atomistic structure and dynamics of the human MHC-I peptide-loading complex.29
330976672020HLA tapasin independence: broader peptide repertoire and HIV control.34
327883702020Atomistic structure and dynamics of the human MHC-I peptide-loading complex.29
330976672020HLA tapasin independence: broader peptide repertoire and HIV control.34
267544812016Molecular mechanism of peptide editing in the tapasin-MHC I complex.33

Citation

Dessen P

TAPBP (TAP binding protein)

Atlas Genet Cytogenet Oncol Haematol. 2003-02-01

Online version: http://atlasgeneticsoncology.org/gene/42470/tapbp