TBX10 (T-box transcription factor 10)

2014-11-01 Affiliation

Identity

HGNC

TBX10

LOCATION

11q13.2

LOCUSID

347853

ALIAS

TBX13,TBX7

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 347853
MIM: 604648
HGNC: 11593
Ensembl: ENSG00000167800

Variants:

dbSNP: 347853
ClinVar: 347853
TCGA: ENSG00000167800
COSMIC: TBX10

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000167800	ENST00000335385	O75333

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
16327884	2005	Medical sequencing of candidate genes for nonsyndromic cleft lip and palate.	70
20634891	2010	Maternal genes and facial clefts in offspring: a comprehensive search for genetic associations in two population-based cleft studies from Scandinavia.	18
16247549	2006	PAX9 and TGFB3 are linked to susceptibility to nonsyndromic cleft lip with or without cleft palate in the Japanese: population-based and family-based candidate gene analyses.	17
20672350	2010	Genetic variants in COL2A1, COL11A2, and IRF6 contribute risk to nonsyndromic cleft palate.	13
20544801	2010	Association between genetic variants of reported candidate genes or regions and risk of cleft lip with or without cleft palate in the polish population.	11
20572854	2010	MTHFR and MSX1 contribute to the risk of nonsyndromic cleft lip/palate.	7

Citation

Dessen P

TBX10 (T-box transcription factor 10)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74551/tbx10