| Nomenclature |
|---|
| HGNC (Hugo) | TBX15 11594 |
| Cards |
|---|
| Entrez_Gene (NCBI) | TBX15 6913 T-box transcription factor 15 |
| Aliases | TBX14 |
| GeneCards (Weizmann) | TBX15 |
| Ensembl hg19 (Hinxton) | ENSG00000092607 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000092607 [Gene_View] ENSG00000092607 [Sequence] chr1:118883043-118989556 [Contig_View] TBX15 [Vega] |
| ICGC DataPortal | ENSG00000092607 |
| TCGA cBioPortal | TBX15 |
| AceView (NCBI) | TBX15 |
| Genatlas (Paris) | TBX15 |
| WikiGenes | 6913 |
| SOURCE (Princeton) | TBX15 |
| Genetics Home Reference (NIH) | TBX15 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | TBX15 - chr1:118883043-118989556 - 1p12 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | TBX15 - 1p12 [Description] (hg19-Feb_2009) |
| GoldenPath | TBX15 - 1p12 [CytoView hg19] TBX15 - 1p12 [CytoView hg38] |
| ImmunoBase | ENSG00000092607 |
| Mapping of homologs : NCBI | TBX15 [Mapview hg19] TBX15 [Mapview hg38] |
| OMIM | 260660 604127 |
| Gene and transcription |
|---|
| Genbank (Entrez) | AK096396 AK127536 BC122553 BX537778 CA412451 |
| RefSeq transcript (Entrez) | NM_001330677 NM_152380 |
| RefSeq genomic (Entrez) | |
| Consensus coding sequences : CCDS (NCBI) | TBX15 |
| Cluster EST : Unigene | Hs.146196 [ NCBI ] |
| CGAP (NCI) | Hs.146196 |
| Alternative Splicing Gallery | ENSG00000092607 |
| Gene Expression | TBX15 [ NCBI-GEO ] TBX15 [ EBI - ARRAY_EXPRESS ]
TBX15 [ SEEK ] TBX15 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | TBX15 [ Firebrowse - Broad ] |
| SOURCE (Princeton) | Expression in : [Datasets] [Normal Tissue Atlas] [carcinoma Classsification] [NCI60] |
| Genevestigator | Expression in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 6913 |
| GTEX Portal (Tissue expression) | TBX15 |
| Human Protein Atlas | ENSG00000092607-TBX15 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | Q96SF7 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | Q96SF7 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | Q96SF7 |
| Splice isoforms : SwissVar | Q96SF7 |
| PhosPhoSitePlus | Q96SF7 |
| Domaine pattern : Prosite (Expaxy) | TBOX_1 (PS01283) TBOX_2 (PS01264) TBOX_3 (PS50252) |
| Domains : Interpro (EBI) | p53-like_TF_DNA-bd T-box_sf TF_T-box TF_T-box_CS |
| Domain families : Pfam (Sanger) | T-box (PF00907) |
| Domain families : Pfam (NCBI) | pfam00907 |
| Domain families : Smart (EMBL) | TBOX (SM00425) |
| Conserved Domain (NCBI) | TBX15 |
| DMDM Disease mutations | 6913 |
| Blocks (Seattle) | TBX15 |
| Superfamily | Q96SF7 |
| Human Protein Atlas [tissue] | ENSG00000092607-TBX15 [tissue] |
| Peptide Atlas | Q96SF7 |
| HPRD | 16035 |
| IPI | IPI00163361 IPI00643004 IPI00844280 IPI00874142 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | Q96SF7 |
| IntAct (EBI) | Q96SF7 |
| FunCoup | ENSG00000092607 |
| BioGRID | TBX15 |
| STRING (EMBL) | TBX15 |
| ZODIAC | TBX15 |
| Ontologies - Pathways |
|---|
| QuickGO | Q96SF7 |
| Ontology : AmiGO | negative regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II RNA polymerase II regulatory region sequence-specific DNA binding RNA polymerase II proximal promoter sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific RNA polymerase II activating transcription factor binding DNA-binding transcription repressor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific cell fate specification protein binding nucleus protein homodimerization activity positive regulation of transcription by RNA polymerase II protein heterodimerization activity embryonic cranial skeleton morphogenesis Tle3-Aes complex Tle3-Aes complex |
| Ontology : EGO-EBI | negative regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II RNA polymerase II regulatory region sequence-specific DNA binding RNA polymerase II proximal promoter sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific RNA polymerase II activating transcription factor binding DNA-binding transcription repressor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific cell fate specification protein binding nucleus protein homodimerization activity positive regulation of transcription by RNA polymerase II protein heterodimerization activity embryonic cranial skeleton morphogenesis Tle3-Aes complex Tle3-Aes complex |
| NDEx Network | TBX15 |
| Atlas of Cancer Signalling Network | TBX15 |
| Wikipedia pathways | TBX15 |
| Orthology - Evolution |
|---|
| OrthoDB | 6913 |
| GeneTree (enSembl) | ENSG00000092607 |
| Phylogenetic Trees/Animal Genes : TreeFam | TBX15 |
| HOGENOM | Q96SF7 |
| Homologs : HomoloGene | TBX15 |
| Homology/Alignments : Family Browser (UCSC) | TBX15 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Mitelman | DDX20/TBX15 [1p13.2/1p12] [t(1;1)(p12;p13)] |
| Fusion : Mitelman | IGSF3/TBX15 [1p13.1/1p12] [t(1;1)(p12;p13)] |
| Fusion Portal | DDX20 1p13.2 TBX15 1p12 LAML |
| Fusion Portal | IGSF3 1p13.1 TBX15 1p12 BRCA |
| Fusion : Quiver | TBX15 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | TBX15 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | TBX15 |
| dbVar | TBX15 |
| ClinVar | TBX15 |
| 1000_Genomes | TBX15 |
| Exome Variant Server | TBX15 |
| ExAC (Exome Aggregation Consortium) | ENSG00000092607 |
| GNOMAD Browser | ENSG00000092607 |
| Varsome Browser | TBX15 |
| Genetic variants : HAPMAP | 6913 |
| Genomic Variants (DGV) | TBX15 [DGVbeta] |
| DECIPHER | TBX15 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | TBX15 |
| Mutations |
|---|
| ICGC Data Portal | TBX15 |
| TCGA Data Portal | TBX15 |
| Broad Tumor Portal | TBX15 |
| OASIS Portal | TBX15 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | TBX15 [overview] [genome browser] [tissue] [distribution] |
| Somatic Mutations in Cancer : COSMIC3D | TBX15 |
| Mutations and Diseases : HGMD | TBX15 |
| LOVD (Leiden Open Variation Database) | Whole genome datasets |
| LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
| LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
| BioMuta | search TBX15 |
| DgiDB (Drug Gene Interaction Database) | TBX15 |
| DoCM (Curated mutations) | TBX15 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | TBX15 (select a term) |
| intoGen | TBX15 |
| Cancer3D | TBX15(select the gene name) |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | 260660 604127 |
| Orphanet | 12268 |
| DisGeNET | TBX15 |
| Medgen | TBX15 |
| Genetic Testing Registry | TBX15
|
| NextProt | Q96SF7 [Medical] |
| TSGene | 6913 |
| GENETests | TBX15 |
| Target Validation | TBX15 |
| Huge Navigator |
TBX15 [HugePedia] |
| snp3D : Map Gene to Disease | 6913 |
| BioCentury BCIQ | TBX15 |
| ClinGen | TBX15 |
| Clinical trials, drugs, therapy |
|---|
| Chemical/Protein Interactions : CTD | 6913 |
| Chemical/Pharm GKB Gene | PA36357 |
| Clinical trial | TBX15 |
| Miscellaneous |
|---|
| canSAR (ICR) | TBX15 (select the gene name) |
| DataMed Index | TBX15 |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 20 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| CoreMine | TBX15 |
| EVEX | TBX15 |
| GoPubMed | TBX15 |
| iHOP | TBX15 |
